DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnk3a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001025333.1 Gene:kcnk3a / 561866 ZFINID:ZDB-GENE-040724-171 Length:390 Species:Danio rerio


Alignment Length:230 Identity:57/230 - (24%)
Similarity:92/230 - (40%) Gaps:76/230 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQL 143
            |::....|.::|..:|..||:..:|::.    |..:|..|||   .:|.|:      :.:..::|
Zfish    11 LIICTFTYLLVGAAVFDALESKMEITQK----KILDDRKREL---MDKYNL------SKVNFDEL 62

  Fly   144 RRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIG 208
            .|    :|...:...||                            ..|.|:.:..:::|||||||
Zfish    63 ER----VVLQLKPHKAG----------------------------VQWRFAGSFYFAITVITTIG 95

  Fly   209 HGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPG 273
            :|...|.|..||:..:||||:|:||.|:...|||..:.     |:|       ::..||.|...|
Zfish    96 YGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERIN-----TFV-------KYLLHRLKKCLG 148

  Fly   274 -------------------TSTPSASSAANSREKD 289
                               .||....:||.||.:|
Zfish   149 LRHTEVSMANMVCIGLISCMSTLCVGAAAFSRYED 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 25/69 (36%)
Ion_trans_2 822..896 CDD:462301
kcnk3aNP_001025333.1 Ion_trans_2 <73..132 CDD:462301 27/86 (31%)
Ion_trans_2 173..243 CDD:462301 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.

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