DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnv1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_688404.1 Gene:kcnv1 / 559915 ZFINID:ZDB-GENE-100922-109 Length:485 Species:Danio rerio


Alignment Length:137 Identity:34/137 - (24%)
Similarity:62/137 - (45%) Gaps:10/137 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 YDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLAD 247
            :|..::...:...|..::.|.:||:|:|.:.|.||.||:......|.|:.::.:.:    |::.|
Zfish   354 HDTPETTFTNVPSAWWWATTSMTTVGYGDIRPDTAVGKVMAFICILSGILILALPI----AIIND 414

  Fly   248 GLQCTYVRLCCQ--LQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDAAN 310
            .....|..|..:  ..||.|..::.|  .|:.|..||.....:|...||...|...:|  .:.|:
Zfish   415 RFSACYFTLKMKEAALRHGEVLKRLT--RSSASDMSAIGVNLRDVYARSVLEMLRLQG--RERAS 475

  Fly   311 SETSLND 317
            :.:|..|
Zfish   476 TRSSAGD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 15/63 (24%)
Ion_trans_2 822..896 CDD:462301
kcnv1XP_688404.1 BTB_POZ_KCNV1 41..149 CDD:349731
Ion_trans 195..420 CDD:459842 16/69 (23%)
Blue background indicates that the domain is not in the aligned region.

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