DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna4

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_005169005.1 Gene:kcna4 / 559036 ZFINID:ZDB-GENE-121127-2 Length:667 Species:Danio rerio


Alignment Length:66 Identity:22/66 - (33%)
Similarity:33/66 - (50%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....|...||..|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
Zfish   500 GVILF----SSAVYFAEADEPTSQFTSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAG 560

  Fly   231 V 231
            |
Zfish   561 V 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 18/55 (33%)
Ion_trans_2 822..896 CDD:462301
kcna4XP_005169005.1 K_channel_TID 1..>21 CDD:429748
BTB_POZ 205..331 CDD:453885
Ion_trans 382..582 CDD:459842 22/66 (33%)
Blue background indicates that the domain is not in the aligned region.

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