DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnb2a

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_683673.2 Gene:kcnb2a / 555921 ZFINID:ZDB-GENE-070912-170 Length:824 Species:Danio rerio


Alignment Length:748 Identity:140/748 - (18%)
Similarity:248/748 - (33%) Gaps:220/748 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GCGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDISK 105
            ||..:...|.. .|..||.||:......::.:||    ::|..|..|:   ...|.|:...:..:
Zfish   169 GCCPDKRQKLW-DLLEKPSSSVAAKVLAIISILF----IILSTIALSL---NTLPELQVIDEFGQ 225

  Fly   106 S---AAIAKSREDCLRELWIITE-----------------KLNV--------------LYERNWT 136
            |   ..:|.....|:  .|...|                 .|||              |.|.|.:
Zfish   226 SNDNPNLAHVEAVCI--AWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKS 288

  Fly   137 MLVHEQLRR----FEGSIVAATRQGSAGSSGGGGAGLFHEGSASALG-----------------H 180
            :|..:.:||    |....:....:.:..|:|....|.....|.:.||                 .
Zfish   289 VLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVF 353

  Fly   181 FGYDAGDSQSWSFSEALLYSVTV-ITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGAL 244
            |.....|:..::...|..:..|: :||:|:|.:.|:|..||:......:.||.::.:.:..:   
Zfish   354 FAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPII--- 415

  Fly   245 LADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRR----MANCKGCQ 305
                     |....:..:.|:.:.|:.              :.::..:|:||.    ..|.|   
Zfish   416 ---------VNNFSEFYKEQKRQEKAI--------------KRREALERAKRNGSIVSMNLK--- 454

  Fly   306 YDAANSETSLNDCLEYGQKGKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSG 370
             ||......|.|.:         .:|.|..|..  .:|:|.:..||      :.|:..|.:....
Zfish   455 -DAFARNMELLDVV---------IEKNEDKAAD--NHLSPSRWNYQ------KNPNSELGSKGFD 501

  Fly   371 SALLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAP 435
            |   ||....|....::...:...|::.:...|:|...|:     ...|||              
Zfish   502 S---KYQEVGQLASPERVFRSTPSPQRLNAKSLEQMYNQM-----TAASSM-------------- 544

  Fly   436 ATATIYFPFGHAPSAPGSPAHNQAHPTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRVLAS 500
                         |:.|            |:.:.: :|.:|.:..::...:..:|...:..|  :
Zfish   545 -------------SSSG------------PSASKV-STVVGREEEMEMKVVQCEPRLKEKPV--T 581

  Fly   501 GLQDATAVNLVTASEASTSTLEAITLPP---------PPAYQTASVHAV-RRAK----------- 544
            .::..::|:...:.....|.:|...|.|         ||....:.:.:: :|||           
Zfish   582 EIRSLSSVDSFASCATDISEVERSALLPNFAGRHPRAPPPLDLSQITSLEKRAKQPTIIKEGLYE 646

  Fly   545 FVAKPLPQEINALMDCG--TGSPDLSGRHDLLPPPHSGSPATG----------TAASPL---LTY 594
            ||  |...:.::.|..|  ..|.|.|..:...||..:.....|          ..||.|   :|.
Zfish   647 FV--PCKSDGSSTMSQGEENQSFDQSDENVRSPPQGNQVKLKGLKVNFTESAEEGASNLHLVVTD 709

  Fly   595 TAAATSPQLSAGIKGGSGPAPTAGAPMLVSGAGRGAAALTDNGF-MAAGVCGMG------AAAAP 652
            ..|..:|::..     |.|...||:|.....|..|..|.:..|| :::.....|      ||..|
Zfish   710 DVATLTPKVPV-----SDPLLLAGSPRQSPRATEGDGATSSPGFSLSSSESQRGRNHVDRAAVTP 769

  Fly   653 LPVTSMGAATTTASSAASTLSALLSANSTGNVD 685
               ||..:|...||:.|..:.|..:..|...||
Zfish   770 ---TSPKSAQNCASATAGAVGAEDNIQSGQKVD 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 16/87 (18%)
Ion_trans_2 822..896 CDD:462301
kcnb2aXP_683673.2 BTB_POZ_KCNB2 18..144 CDD:349719
Ion_trans 206..427 CDD:459842 40/237 (17%)
Kv2channel 473..695 CDD:397541 46/281 (16%)
Blue background indicates that the domain is not in the aligned region.

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