DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna5

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_004912856.2 Gene:kcna5 / 496997 XenbaseID:XB-GENE-6037401 Length:616 Species:Xenopus tropicalis


Alignment Length:66 Identity:21/66 - (31%)
Similarity:33/66 - (50%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....|..:|...|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
 Frog   452 GVILF----SSAVYFAEADDPESHFSSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAG 512

  Fly   231 V 231
            |
 Frog   513 V 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 17/55 (31%)
Ion_trans_2 822..896 CDD:462301
kcna5XP_004912856.2 BTB_POZ 152..278 CDD:453885
Ion_trans 281..534 CDD:459842 21/66 (32%)
Blue background indicates that the domain is not in the aligned region.

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