DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and KCNK1

DIOPT Version :9

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_002236.1 Gene:KCNK1 / 3775 HGNCID:6272 Length:336 Species:Homo sapiens


Alignment Length:209 Identity:52/209 - (24%)
Similarity:84/209 - (40%) Gaps:59/209 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LGGVGGAGCGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLE 98
            |..:.|:.|         ..|..:.||:.  |.|.          |||..:.|.|.|.::|..:|
Human     2 LQSLAGSSC---------VRLVERHRSAW--CFGF----------LVLGYLLYLVFGAVVFSSVE 45

  Fly    99 APQDISKSAAIAKSREDCLR-ELWIITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSS 162
            .|.            ||.|| ||    .||...:......|..:||.:|.|.::.|:..|.:..|
Human    46 LPY------------EDLLRQEL----RKLKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLS 94

  Fly   163 GGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYA 227
            ...|                     :.:|.|:.||.::.||::|.|:|...|.:..||...|.|:
Human    95 NASG---------------------NWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYS 138

  Fly   228 LVGVPLMLMCLSSL 241
            ::|:|..|:.|:::
Human   139 VIGIPFTLLFLTAV 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 18/51 (35%)
Ion_trans_2 822..896 CDD:285168
KCNK1NP_002236.1 Ion_trans_2 <101..157 CDD:400301 18/52 (35%)
pore-forming domain 107..123 7/15 (47%)
Ion_trans_2 192..267 CDD:400301
pore-forming domain 212..238
Important for intracellular retention in recycling endosomes. /evidence=ECO:0000269|PubMed:19959478 293..299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I10857
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I4753
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.860

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