DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and KCNC4

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_024302558.1 Gene:KCNC4 / 3749 HGNCID:6236 Length:661 Species:Homo sapiens


Alignment Length:310 Identity:56/310 - (18%)
Similarity:101/310 - (32%) Gaps:100/310 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 YSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLM----CLSSLGALLADGLQCTYVRLCCQ 259
            ::|..:||:|:|.:.|:|.:|.|.....||.||..:.|    .:::.|         .|..|...
Human   429 WAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFG---------MYYSLAMA 484

  Fly   260 LQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLNDCLEYGQK 324
            .|:..:.|:|..|..:  ...|....:.::|..|             |:..|:||          
Human   485 KQKLPKKRKKHVPRPA--QLESPMYCKSEETSPR-------------DSTCSDTS---------- 524

  Fly   325 GKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDV-MLMTTTSGSALLKYAPQQQQLQQQQQ 388
               ||.::||             ...:::....|..|. .:::...|:.|            .|.
Human   525 ---PPAREEG-------------MIERKRADSKQNGDANAVLSDEEGAGL------------TQP 561

  Fly   389 LSTATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSAPGS 453
            |:::..|.:...::....:.:.::                       |.|......|....|.||
Human   562 LASSPTPEERRALRRSTTRDRNKK-----------------------AAACFLLSTGDYACADGS 603

  Fly   454 PAHNQAHPTQNPN-----GNALGNTTLGSQ-----PLVKYHTIHLQPASG 493
            ............|     |.:||.:.|.|:     ||.|:......|.:|
Human   604 VRKGCGKSRSLNNIVGAAGTSLGLSPLASRYSLPYPLKKFLLTPFHPLTG 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 15/51 (29%)
Ion_trans_2 822..896 CDD:462301
KCNC4XP_024302558.1 Potassium_chann 1..29 CDD:431870
BTB_KCNC2_4 35..158 CDD:349722
Ion_trans 225..483 CDD:459842 17/62 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.