DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and KCNA2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_004965.1 Gene:KCNA2 / 3737 HGNCID:6220 Length:499 Species:Homo sapiens


Alignment Length:169 Identity:39/169 - (23%)
Similarity:68/169 - (40%) Gaps:25/169 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....|..:||..|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
Human   338 GVILF----SSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAG 398

  Fly   231 -------VPLMLMCLS------SLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPS---- 278
                   ||:::...:      :.|...|..||.|   .|.::....:.::..:..|.:.|    
Human   399 VLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVT---SCPKIPSSPDLKKSRSASTISKSDYME 460

  Fly   279 ASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLND 317
            .....|:..:|. :....:.|||.....:..|....|.|
Human   461 IQEGVNNSNEDF-REENLKTANCTLANTNYVNITKMLTD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 20/82 (24%)
Ion_trans_2 822..896 CDD:462301
KCNA2NP_004965.1 Tetramerization domain. /evidence=ECO:0000250|UniProtKB:P63142 1..125
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
BTB_POZ 33..159 CDD:453885
Ion_trans 162..420 CDD:459842 23/85 (27%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 312..325
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 2/4 (50%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P63142 497..499 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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