DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnk5

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001034605.1 Gene:Kcnk5 / 364241 RGDID:1564985 Length:503 Species:Rattus norvegicus


Alignment Length:168 Identity:50/168 - (29%)
Similarity:80/168 - (47%) Gaps:41/168 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 PGLVLLVIGYSVLGGLLFPLLEAP--QDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLV 139
            |.|...:|.|..:|..:|.:||.|  ::..|:               ..|:||::|.|  :..|.
  Rat     6 PLLTSAIIFYLAIGAAIFEVLEEPHWKEAKKN---------------YYTQKLHLLKE--FPCLS 53

  Fly   140 HEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVI 204
            .|.|.:....:..|..||.|.:    |...|:                  :|::..|::::.|||
  Rat    54 QEGLDKILQVVSDAADQGVAIT----GNQTFN------------------NWNWPNAMIFAATVI 96

  Fly   205 TTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLG 242
            ||||:|::.|:|.||:|..:||.|.||||.|..:|:||
  Rat    97 TTIGYGNVAPKTPAGRLFCVFYGLFGVPLCLTWISALG 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 26/66 (39%)
Ion_trans_2 822..896 CDD:462301
Kcnk5NP_001034605.1 Ion_trans_2 <83..137 CDD:462301 26/52 (50%)
Ion_trans_2 171..243 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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