DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and sand

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_610349.1 Gene:sand / 35777 FlyBaseID:FBgn0033257 Length:395 Species:Drosophila melanogaster


Alignment Length:297 Identity:88/297 - (29%)
Similarity:138/297 - (46%) Gaps:73/297 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RSSLRR-----------CCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEA-PQDISKSAA--- 108
            |||.||           .|.|....:||..|::|||..|.:.|..:|..:|. ..:..||..   
  Fly     5 RSSFRRREKPAFERFKDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYERLKSEKPHR 69

  Fly   109 -IAKS-REDCLRELWIIT-EKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLF 170
             ||:: ..:||..:|.:| |.::......:...|::.|..::.:||....:|.            
  Fly    70 FIARNFSGECLSRIWELTAENISFFDHHAYRRRVNDVLLDYQRAIVKKQLKGP------------ 122

  Fly   171 HEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLML 235
                            |.:.||||.|.|||:|||||||:|::||.:..|||.||.||::|:||.|
  Fly   123 ----------------DVEQWSFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFL 171

  Fly   236 MCLSSLGALLADGLQCTYVRLC-CQ-----------------------LQRH-QEHRRKSTPGTS 275
            :.||::|.:||...:..|.::| |:                       ||.| .|:.|.|:..||
  Fly   172 LYLSNIGDVLAKSFKWIYSKVCLCRICPGVAKRRIIRERRKMRQLARALQMHDMENARGSSSYTS 236

  Fly   276 TPSASSAANSREKDTDKRSKRRMANCKGCQYDAANSE 312
            |.|.:|:.:|..:.|  ||.|:.::....||..::|:
  Fly   237 TSSTTSSNSSSSEYT--RSSRQSSSLVDIQYTESDSD 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 34/69 (49%)
Ion_trans_2 822..896 CDD:462301
sandNP_610349.1 Ion_trans_2 <127..183 CDD:462301 33/55 (60%)
Ion_trans_2 292..376 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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