DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnd3

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_005167059.1 Gene:kcnd3 / 327415 ZFINID:ZDB-GENE-030131-5626 Length:650 Species:Danio rerio


Alignment Length:447 Identity:91/447 - (20%)
Similarity:139/447 - (31%) Gaps:183/447 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 FGYDAGDSQS--WSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGA 243
            |..:.|.|.|  .|...:..|::..:||:|:|.:.|:|.|||:.....:|.||.::        |
Zfish   339 FYAEKGSSSSKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVI--------A 395

  Fly   244 LLADGLQCTYVRLCCQLQRHQEHR------------RKSTPGTSTPSASSAANSREKDTDKRSKR 296
            |....:...:.|:..|.||..:.:            |.|..|:||....|..|            
Zfish   396 LPVPVIVSNFSRIYHQNQRADKRKAQKVQKARLARMRISKSGSSTAFLHSKRN------------ 448

  Fly   297 RMANCKGCQYDAANSETSLNDCLEYGQKGKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPD 361
                             .||..||..|   ||                    :|:          
Zfish   449 -----------------GLNQSLELTQ---LP--------------------YYK---------- 463

  Fly   362 VMLMTTTSGSALLKYAPQQQQLQQQQQL--STATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRM 424
                        :|.:| |..|::.|||  :|:.|..|||.: |...::.....|          
Zfish   464 ------------MKLSP-QGSLEEDQQLKKTTSLLESQHHHL-LHCLEKTTNHEF---------- 504

  Fly   425 PLTVPPNCYAPA---TATIYFPFGHAPSAPGSPAHNQAHPTQNPNGNALGNTTLGSQPL----VK 482
               |....|...   ||...|| ..:||............::.|..|.        |||    ..
Zfish   505 ---VDERLYEQGYLQTALQNFP-SQSPSLSSEEGITGTCCSRRPKKNI--------QPLNATHTH 557

  Fly   483 YHTIHLQPASGKHRVLASGLQ-----DATAVNLVTASEASTS-------TLEAITLPPPPAYQTA 535
            .||.:||..|..|  :..|.|     ..:::||::....|.:       |...|::|.||:..:.
Zfish   558 SHTHNLQELSALH--IQCGEQQPLNTSRSSLNLMSDESGSLNCKSSGLVTTAIISIPTPPSNNSR 620

  Fly   536 SVHAVRRAKFVAKPLPQEINALMDCGTGSPDLSGRHDLLPPPHSGSPATGTAASPLL 592
            :                           |||...      ||:..:|       |||
Zfish   621 A---------------------------SPDAPS------PPNPEAP-------PLL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 20/67 (30%)
Ion_trans_2 822..896 CDD:462301
kcnd3XP_005167059.1 BTB_POZ_KCND3 6..143 CDD:349726
Ion_trans 181..411 CDD:459842 21/79 (27%)
DUF3399 481..556 CDD:463381 20/97 (21%)
Blue background indicates that the domain is not in the aligned region.

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