DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcna10

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001178642.1 Gene:Kcna10 / 295360 RGDID:1304667 Length:511 Species:Rattus norvegicus


Alignment Length:139 Identity:32/139 - (23%)
Similarity:54/139 - (38%) Gaps:22/139 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....|..:|...|..:...::|..:||:|:|.:.|.|..||:.....|:.|
  Rat   385 GVILF----SSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAG 445

  Fly   231 VPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRK-STPG------TSTPSASSAANSREK 288
            |    :.::....::.......|       .|..|:..| :.||      .|..|.:.:..|..|
  Rat   446 V----LTIALPVPVIVSNFNYFY-------HRETENEEKPNIPGELDKILNSMGSRTGSTESLNK 499

  Fly   289 DTDKRSKRR 297
            ....||..:
  Rat   500 TNSSRSAEK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 16/69 (23%)
Ion_trans_2 822..896 CDD:462301
Kcna10NP_001178642.1 BTB_POZ 86..212 CDD:453885
Ion_trans 262..467 CDD:459842 21/96 (22%)
Blue background indicates that the domain is not in the aligned region.

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