DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnv2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001099840.1 Gene:Kcnv2 / 294065 RGDID:1309271 Length:561 Species:Rattus norvegicus


Alignment Length:294 Identity:64/294 - (21%)
Similarity:97/294 - (32%) Gaps:96/294 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   654 PVTSMGAATTTASSAASTLSALLS--ANSTGNVDIMEDEDEQERERLSNCPHGTPSRVPLIASPL 716
            |.:|:.|   .|...||.|..|:|  |.:...|:.|:.:.||      ....|.|..:......|
  Rat   260 PFSSVAA---KAMGVASNLFVLISVVALALNTVEEMQHQAEQ------GTGGGDPRPILEHVEML 315

  Fly   717 SVPQDSGENTTRNTAFNRHTLQPLSRKTLLLTRRCHRHASGTL-----------YDSTANNTETS 770
            .|            ||  .||:.|.|  |..|....|.|...|           |........||
  Rat   316 CV------------AF--FTLEFLLR--LASTPNLRRFARSALNLVDLVAILPFYLQLLLECFTS 364

  Fly   771 DDEEY-----MQHGSEQ-------------------FVLKKLRYHCDG--------KDCREAEDS 803
            :|:.:     .:|..|.                   |.:.||..|..|        :.|.:    
  Rat   365 EDQRHGKGSPREHDLETVGRVGKVGQVLRIMRLMRIFRILKLARHSTGLRAFGFTLRQCYQ---- 425

  Fly   804 EEEDEKADGRQVPISLVLLILASYICVGTVIFALWEN------WSLVDGAYFCFVTLSTIGYGDF 862
                      ||. .|:|.|..........::::..:      .|::...::..|::||:||||.
  Rat   426 ----------QVG-CLMLFITMGIFSFSAAVYSVEHDVPGTNFTSILHAWWWAAVSISTVGYGDM 479

  Fly   863 VPARSFNGPELQLYACCAYLLLGLVLVAMSFSIL 896
            .|.....  .|..:.|.|:   |::|..|..|||
  Rat   480 YPETHLG--RLFAFLCIAF---GIILNGMPISIL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 17/79 (22%)
Kcnv2NP_001099840.1 BTB_POZ 106..213 CDD:453885
Ion_trans 275..520 CDD:459842 58/276 (21%)
Blue background indicates that the domain is not in the aligned region.

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