Protein Alignment CG1688 and Kcna1

DIOPT Version :10

• Sequence 1: NP_610516.1
• Gene: CG1688 / 36005
• FlyBaseID: FBgn0027589
• Length: 918
• Species: Drosophila melanogaster
• Sequence 2: NP_775118.1
• Gene: Kcna1 / 24520
• RGDID: 2949
• Length: 495
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 37/167 - (22%)
• Similarity: 64/167 - (38%)
• Gaps: 23/167 - (13%)

  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....:..:|...|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
  Rat   336 GVILF----SSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAG 396

  Fly   231 VPLMLMCLSSLGALLADGLQCTYVRLC-----CQLQRHQEHRRKSTPGTSTPSASSAANSR---- 286
            |    :.::....::.......|.|..     .||.........|....|..|:|:.:.|.
  Rat   397 V----LTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNLASDSDLSRRSSSTISKSEYMEI 457

  Fly   287 EKDTD------KRSKRRMANCKGCQYDAANSETSLND 317
            |:|.:      :::..|..||.....:..|....|.|
  Rat   458 EEDMNNSIAHYRQANIRTGNCTATDQNCVNKSKLLTD 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1688	NP_610516.1	Ion_trans_2	177..247	CDD:462301	16/69 (23%)
		Ion_trans_2	822..896	CDD:462301
Kcna1	NP_775118.1	Tetramerization domain. /evidence=ECO:0000305	1..128
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..30
		BTB_POZ	37..163	CDD:453885
		Ion_trans	166..418	CDD:459842	21/89 (24%)
		S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142	310..323
		Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142	372..377		2/4 (50%)
		PDZ-binding. /evidence=ECO:0000305	493..495		1/2 (50%)