DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and twk-10

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001300134.1 Gene:twk-10 / 192080 WormBaseID:WBGene00006665 Length:429 Species:Caenorhabditis elegans


Alignment Length:239 Identity:59/239 - (24%)
Similarity:95/239 - (39%) Gaps:60/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ATEFGGLGGVGGAGCGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGL 92
            |.:.|||..:        |..:..  :..|.||...| ..||.:......||:||.|.|...|.|
 Worm     2 ARKAGGLAAI--------MSGQPV--VVVKKRSVFWR-LRHLTRQGGLHVGLILLCILYVHFGAL 55

  Fly    93 LFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWT--MLVHEQLRR---------- 145
            .|...|:|:: .:.....:.|.|.|||.::  |.:|.:...:::  ..|:|.:.|          
 Worm    56 FFMYSESPEE-QRILRRVEKRYDILRETFL--ENVNRVKLEDFSDERRVNESISRLIDDYSKHMF 117

  Fly   146 --FEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQS-----WSFSEALLYSVTV 203
              |...:.|....           .||:                |||     |:...:||::.|.
 Worm   118 KLFTNPVAANMFD-----------CLFY----------------SQSNYTPLWTTDSSLLFTATT 155

  Fly   204 ITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLAD 247
            |..:|:|.:.|.|:.|::....||..|:||.|:.:|.:|...||
 Worm   156 IIPVGYGYIAPLTSTGRIVLCIYAAFGIPLALVMMSDVGKFFAD 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 21/74 (28%)
Ion_trans_2 822..896 CDD:462301
twk-10NP_001300134.1 Ion_trans_2 128..199 CDD:462301 23/97 (24%)
Ion_trans_2 218..286 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.