DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and twk-13

DIOPT Version :9

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001122984.1 Gene:twk-13 / 192077 WormBaseID:WBGene00006668 Length:625 Species:Caenorhabditis elegans


Alignment Length:320 Identity:81/320 - (25%)
Similarity:135/320 - (42%) Gaps:94/320 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQ 142
            |||||.|||:::|.|.|...|.|.:       .:.|.:..|.   |.|..|.:.::.|.|     
 Worm   118 GLVLLSIGYTLIGALCFHHYEKPYE-------QQLRNETSRR---IGELKNRVMDQLWRM----- 167

  Fly   143 LRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYD------------AGDSQ-SWSFS 194
                       :..|:|.|:....|   ::|....:....:|            .||.. .|||.
 Worm   168 -----------SNNGTAYSTWRQTA---NDGMDELIRDVFWDYTRNYMTPDDVIYGDGPIKWSFM 218

  Fly   195 EALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTY-VRL-- 256
            .::.:|.|.|||||:|.:.|||..|::|.|||||:|:||:|:.::.:|..||     || ::|  
 Worm   219 SSIFFSWTAITTIGYGHIVPRTDEGRVAIIFYALLGIPLILVTIADIGRFLA-----TYIIKLHH 278

  Fly   257 --------------------CCQLQRHQEH-----------RRKSTPGTSTPSASSAANSREKDT 290
                                ||.::..:.|           .:|..|..:.|:.::.|.|....|
 Worm   279 GYMAVMSFVTNSCLKCIKWACCWIRLPRRHIPMPTLELLQRTQKLYPNNNNPTVAATAASAGGGT 343

  Fly   291 DKRSKRRMANCKGCQYDAANSE--TSLNDCLEYGQKGKLPPDKKEGDACQLLRNLNPQQH 348
            .:|.|::..|..    ||...:  :.:||..|.|:      ::.||:..:.:: .:|..|
 Worm   344 GRRKKQQRDNVS----DAGTFDNISEINDGSEGGE------NENEGEEEEQIQ-FDPSNH 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 27/55 (49%)
Ion_trans_2 822..896 CDD:285168
twk-13NP_001122984.1 Ion_trans_2 <214..269 CDD:285168 26/54 (48%)
Ion_trans <398..464 CDD:278921
Ion_trans_2 403..478 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.