DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and twk-40

DIOPT Version :9

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001255206.1 Gene:twk-40 / 189006 WormBaseID:WBGene00006691 Length:436 Species:Caenorhabditis elegans


Alignment Length:256 Identity:59/256 - (23%)
Similarity:107/256 - (41%) Gaps:63/256 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAK----SRE 114
            :|::|.::.:.    ..:::.:...|::|.:.|...|..||..||.|.::...|...:    .:.
 Worm    39 ITSRPMATWKT----YARIILAHVSLIVLSVVYVGFGAFLFYQLEQPNEVEVRARNIERFNIHKR 99

  Fly   115 DCLRELW---------IITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLF 170
            ..:..||         .:.|.|.|.|..|.|.::.|   .|:...:.|......|..        
 Worm   100 QMIEHLWEMRESGIGQHVVEDLAVKYVDNVTRILFE---AFDTHCIGAKHLRPGGED-------- 153

  Fly   171 HEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLML 235
                            :..:|::..||.::.|::||||:|:|||.|..|||..|.|||.||||:|
 Worm   154 ----------------EDYNWTYMTALFFTTTLLTTIGYGNLTPVTGRGKLLCILYALFGVPLIL 202

  Fly   236 MCLSSLGALLADGLQCTY-----VRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTD 291
            :.::.:|..|::.:...|     :|..|..|::              |..|:.:.:.|:.|
 Worm   203 ITVADIGKFLSENIVQLYTWYRKLREKCSKQKY--------------SVISSKDDKNKEGD 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 27/55 (49%)
Ion_trans_2 822..896 CDD:285168
twk-40NP_001255206.1 Ion_trans_2 <174..214 CDD:285168 21/39 (54%)
Ion_trans_2 269..343 CDD:285168
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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