DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and kvs-3

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_505407.2 Gene:kvs-3 / 185719 WormBaseID:WBGene00018402 Length:451 Species:Caenorhabditis elegans


Alignment Length:237 Identity:53/237 - (22%)
Similarity:86/237 - (36%) Gaps:57/237 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTAKPRSSLRR---CCGHLLKLLFSTPGLVL---------------LVIGYSVLGGLLFP----- 95
            |...||||...   ..|..|.:|.|..||:|               |:....:|..:.|.     
 Worm   171 LMENPRSSSGAKIFSVGSALFVLLSLLGLILSSMPELQDENKEPHYLLHWLELLCMVYFTFEYLA 235

  Fly    96 -LLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNW------TMLVHEQLRRFEGSIVAA 153
             ||..|    |.|...:|..:.:..|.::...:....|..|      .|||...:|....:.:..
 Worm   236 RLLVNP----KKAEFIRSPLNVIDLLTVLPFMIEAFNELQWMKEFRGAMLVVRVMRLARVARIFK 296

  Fly   154 TRQGSAGSSGGG-------------------GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLY 199
            ..:.|.|....|                   |..||    ::|:..|..|..:|:.:|...|..:
 Worm   297 LARYSTGLRAFGETMKKSAAELSMLGMFLVTGIMLF----STAIYFFERDEPNSKFYSIPAACWW 357

  Fly   200 SVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSL 241
            .|..:||:|:|.|.|.||.||:.....::.|:.::...:|.:
 Worm   358 CVITMTTVGYGDLVPITAGGKVVAALASVCGIIVLAFPISMI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 19/65 (29%)
Ion_trans_2 822..896 CDD:462301
kvs-3NP_505407.2 BTB_POZ_Kv 28..118 CDD:349626
Ion_trans 210..407 CDD:459842 41/198 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.