DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and twk-30

DIOPT Version :9

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_492381.3 Gene:twk-30 / 185335 WormBaseID:WBGene00006682 Length:608 Species:Caenorhabditis elegans


Alignment Length:205 Identity:49/205 - (23%)
Similarity:107/205 - (52%) Gaps:28/205 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIG----YSVLGGLLFPLLEAPQ-DISKS---AAIAKSREDCLRELWIITEKLNVLYERNW 135
            |.:|:||    |.:||.::|.:||... |..|.   |.|.::.:|.:.:||.:.::     :|  
 Worm     7 LHVLLIGSVVLYIILGAIVFQMLEGEHLDALKKDHMAKIEQNAKDYVDKLWSVAKR-----DR-- 64

  Fly   136 TMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYS 200
                 ::.:..| .::.:.::.:..........:|:  :..|:.| |||. ||.:|.|:.::.::
 Worm    65 -----DKYKNVE-DLIKSVKEDTVDDFNDYVDTVFY--AHRAVRH-GYDE-DSPTWDFANSVFFT 119

  Fly   201 VTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRL---CCQLQR 262
            .|::|:||:|.:.|.|..|:|..:.|.|:|:||.|:.::::...|::.:...:..|   |.:.:|
 Worm   120 TTMLTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTVANVAKFLSETIFFLHYELWNKCLEWKR 184

  Fly   263 HQEHRRKSTP 272
            .::...::.|
 Worm   185 KRKGEVEADP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 <191..247 CDD:285168 18/55 (33%)
Ion_trans_2 822..896 CDD:285168
twk-30NP_492381.3 Ion_trans_2 103..166 CDD:285168 22/63 (35%)
Ion_trans_2 224..298 CDD:285168
FN3 379..469 CDD:238020
FN3 475..565 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 1 1.000 - - FOG0000030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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