DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and twk-30

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_492381.3 Gene:twk-30 / 185335 WormBaseID:WBGene00006682 Length:608 Species:Caenorhabditis elegans


Alignment Length:205 Identity:49/205 - (23%)
Similarity:107/205 - (52%) Gaps:28/205 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIG----YSVLGGLLFPLLEAPQ-DISKS---AAIAKSREDCLRELWIITEKLNVLYERNW 135
            |.:|:||    |.:||.::|.:||... |..|.   |.|.::.:|.:.:||.:.::     :|  
 Worm     7 LHVLLIGSVVLYIILGAIVFQMLEGEHLDALKKDHMAKIEQNAKDYVDKLWSVAKR-----DR-- 64

  Fly   136 TMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYS 200
                 ::.:..| .::.:.::.:..........:|:  :..|:.| |||. ||.:|.|:.::.::
 Worm    65 -----DKYKNVE-DLIKSVKEDTVDDFNDYVDTVFY--AHRAVRH-GYDE-DSPTWDFANSVFFT 119

  Fly   201 VTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRL---CCQLQR 262
            .|::|:||:|.:.|.|..|:|..:.|.|:|:||.|:.::::...|::.:...:..|   |.:.:|
 Worm   120 TTMLTSIGYGYVAPSTFGGRLFGVIYCLIGIPLTLVTVANVAKFLSETIFFLHYELWNKCLEWKR 184

  Fly   263 HQEHRRKSTP 272
            .::...::.|
 Worm   185 KRKGEVEADP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 25/69 (36%)
Ion_trans_2 822..896 CDD:462301
twk-30NP_492381.3 Ion_trans_2 103..166 CDD:462301 22/63 (35%)
Ion_trans_2 221..298 CDD:462301
FN3 <372..>565 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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