DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kvs-1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001360715.1 Gene:kvs-1 / 183753 WormBaseID:WBGene00002242 Length:499 Species:Caenorhabditis elegans


Alignment Length:214 Identity:44/214 - (20%)
Similarity:82/214 - (38%) Gaps:43/214 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIGYSVLGGLLFPL-LEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQ 142
            ::.::..|..||..||.: :.:..||..:..:.:    .||.|.::    .:|....::    ..
 Worm   323 MIAIIPFYLELGLALFGIDVASLSDIKGALLVVR----VLRVLRVV----RILKLGRYS----SG 375

  Fly   143 LRRFEGSIVAATRQ-GSAGSSGGGGAGLFHEGSASALGHF-GYDAGDSQSWSFSEALLYSVTVIT 205
            :|.|..::.::.|| |..|.....|...|     |.|.:| ..|..|:...|...|..:::..:|
 Worm   376 MRTFALTLKSSARQLGMMGMVLSTGVVFF-----STLLYFVEKDEKDTPFTSIPAAFWWAIVTMT 435

  Fly   206 TIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKS 270
            |:|:|...|.|..|||......:.||.::.:.::    ::.|...                   .
 Worm   436 TVGYGDYVPVTVPGKLIASGAIISGVLVLALPIT----IIVDNFM-------------------K 477

  Fly   271 TPGTSTPSASSAANSREKD 289
            ..|....:..|:||.|..|
 Worm   478 VSGNVNANIFSSANQRPID 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 17/70 (24%)
Ion_trans_2 822..896 CDD:462301
kvs-1NP_001360715.1 BTB_POZ_Kv 73..163 CDD:349626
Ion_trans 279..475 CDD:459842 38/172 (22%)
Blue background indicates that the domain is not in the aligned region.

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