DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and twk-37

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_491810.2 Gene:twk-37 / 183583 WormBaseID:WBGene00006689 Length:382 Species:Caenorhabditis elegans


Alignment Length:267 Identity:51/267 - (19%)
Similarity:89/267 - (33%) Gaps:129/267 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VEQAIKAKQPQPSQLDCSIDDETDATEFGGLGGVGGAGCGSEMGAKTTASLTAKPRSSLRRCCGH 68
            ||:..:|::|:|::|                                        |:.||:    
 Worm    69 VERKSRAERPKPTKL----------------------------------------RTILRK---- 89

  Fly    69 LLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQDI----------------------SKSAAIAK 111
            :.|  |:|....::::.|.:.|.|||..:|:..|:                      ||...:.|
 Worm    90 IRK--FNTIIAFVVLVAYIIGGALLFWQIESRSDMNINEFKRNIRQKSIHIYNSMKGSKCGKLKK 152

  Fly   112 S----REDCLRELWIITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGAGLFHE 172
            :    ..:|::|::      ::||..|....:.|                               
 Worm   153 ADNELNNNCIKEIF------DLLYASNPPKHIEE------------------------------- 180

  Fly   173 GSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMC 237
                                |.:.|.|.:|.|||||:|.|...|.||||.|:.|.::|:.|.|..
 Worm   181 --------------------FLDGLAYVITCITTIGYGELVCHTIAGKLVTVAYGIIGIALTLYV 225

  Fly   238 LSSLGAL 244
            |.:.|.:
 Worm   226 LRNNGKI 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 23/68 (34%)
Ion_trans_2 822..896 CDD:462301
twk-37NP_491810.2 Ion_trans_2 <181..235 CDD:462301 23/52 (44%)
Ion_trans_2 266..336 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.