DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and twk-18

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001379714.1 Gene:twk-18 / 181139 WormBaseID:WBGene00006672 Length:461 Species:Caenorhabditis elegans


Alignment Length:251 Identity:64/251 - (25%)
Similarity:105/251 - (41%) Gaps:47/251 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQLR 144
            :::::.|::||..:|.::|...:........|.|::.:|.......:|.:..:|. .|...|:..
 Worm    25 LIILVAYTLLGAWIFWMIEGENEREMLIEQQKERDELIRRTVYKINQLQIKRQRR-LMTAEEEYN 88

  Fly   145 RFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGH 209
            |  .:.|..|.|                   ..||....|......|:|..::.|.:||.||||:
 Worm    89 R--TAKVLTTFQ-------------------ETLGIVPADMDKDIHWTFLGSIFYCMTVYTTIGY 132

  Fly   210 GSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGT 274
            |::.|.|..|:.|||.||.:|:||.::.|..||:|.|.|        |..|.|   ...|||...
 Worm   133 GNIVPGTGWGRFATILYAFIGIPLTVLSLYCLGSLFAKG--------CKMLWR---FFLKSTRVV 186

  Fly   275 S---TPSASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLNDCLEYGQKGKL 327
            |   :...|.||::.|:.|...:.           .|..:|.:.:|.|.:...|.|
 Worm   187 SKDLSNKISEAADNIEEGTTAITP-----------SAEKTENNDDDLLSFPISGLL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 28/69 (41%)
Ion_trans_2 822..896 CDD:462301
twk-18NP_001379714.1 Ion_trans_2 <113..170 CDD:462301 25/56 (45%)
Ion_trans_2 232..306 CDD:462301 64/251 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.