DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and twk-36

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_507485.2 Gene:twk-36 / 180164 WormBaseID:WBGene00006688 Length:562 Species:Caenorhabditis elegans


Alignment Length:187 Identity:50/187 - (26%)
Similarity:92/187 - (49%) Gaps:31/187 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIGYSVLGGLLFPLLEAPQDISKSAAIAKSREDCLREL-WIITEKLNVLYERNWTMLVHEQ 142
            |::|.:.|::||..:|.|:|...:.|:.....::.:..|.|| .:::|.:|...:.:    .|::
 Worm   173 LLVLALIYTLLGATVFYLIEGSNEKSRLHVREQNLDKLLDELATVLSEAVNDPEQSS----EHQR 233

  Fly   143 LRRF-EGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITT 206
            ::.| :.|.::..:               ||.......::..:..|:..|:||.|..:|:.|.||
 Worm   234 MKEFIKESYISLQK---------------HEEQYKWSTYYRLEHPDNLKWTFSSAFFFSMNVYTT 283

  Fly   207 IGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLG--------ALLADGLQCTYVR 255
            .|:||::.:|.:|:|.|:.||...||:.|:.|..||        .|.|.||  |.||
 Worm   284 TGYGSISAQTFSGQLFTMIYAFCFVPVTLVILRDLGQMFLVNFTKLYAHGL--TAVR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 25/77 (32%)
Ion_trans_2 822..896 CDD:462301
twk-36NP_507485.2 Ion_trans_2 256..322 CDD:462301 24/65 (37%)
Ion_trans_2 361..432 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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