DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and twk-14

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001367281.1 Gene:twk-14 / 179699 WormBaseID:WBGene00006669 Length:463 Species:Caenorhabditis elegans


Alignment Length:225 Identity:59/225 - (26%)
Similarity:88/225 - (39%) Gaps:70/225 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GAGCGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLFSTPGLVL---LVIGYSVLGGLLFPLLEAP 100
            |.|....:.|.|..|:|   |:.:.  |...|::.......||   ::|.|...|.:||..||..
 Worm    41 GIGQREMLRANTLPSIT---RAKVG--CFARLRIYEENARFVLICIILIVYLAFGAILFHWLEWE 100

  Fly   101 QDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGG 165
            .::.:..||.....| .::::...:.||   |.::     |::.||              .|.|.
 Worm   101 NEVDERIAIDNRMAD-YQKVYCKHKPLN---ECDF-----EEMVRF--------------ISDGA 142

  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            .:||.:  |.|...|.|             :|.:|.|||:|||.|:.||||..|:..||.|.:||
 Worm   143 TSGLLN--SRSRFDHLG-------------SLFFSATVISTIGFGTSTPRTHLGRFITIVYGVVG 192

  Fly   231 VPLMLMCLSSLGALLADGLQCTYVRLCCQL 260
                                ||    ||.|
 Worm   193 --------------------CT----CCVL 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 21/69 (30%)
Ion_trans_2 822..896 CDD:462301
twk-14NP_001367281.1 Ion_trans_2 141..208 CDD:462301 31/97 (32%)
Ion_trans_2 272..353 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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