DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and shk-1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_871935.1 Gene:shk-1 / 174536 WormBaseID:WBGene00014261 Length:536 Species:Caenorhabditis elegans


Alignment Length:93 Identity:22/93 - (23%)
Similarity:38/93 - (40%) Gaps:32/93 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 ILASYICVGTVIFALWENWSLVDGAYFC-------------------FVTLSTIGYGDFVPARSF 868
            :|..::.:..|:||        .|.||.                   .||::|:||||.||...|
 Worm   428 LLIFFMAIALVLFA--------SGMYFAEQGEPNSKFTSIPASFWFVLVTMTTVGYGDLVPLSPF 484

  Fly   869 NGPELQLYACCAYLLLGLVLVAMSFSIL 896
            .   ..:...||  ::|::.:|:...|:
 Worm   485 G---KVVGGMCA--MIGVLTLALPVPII 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 21/91 (23%)
shk-1NP_871935.1 BTB_POZ 133..229 CDD:453885
Ion_trans 274..519 CDD:459842 22/93 (24%)
Blue background indicates that the domain is not in the aligned region.

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