DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnd1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_032449.1 Gene:Kcnd1 / 16506 MGIID:96671 Length:651 Species:Mus musculus


Alignment Length:459 Identity:93/459 - (20%)
Similarity:140/459 - (30%) Gaps:177/459 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 FGYDAGDSQS--WSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGA 243
            |..:.|.|::  .|...|..|::..:||:|:|.:.|.|.|||:.....:|.||.::        |
Mouse   345 FYAEKGTSKTNFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVI--------A 401

  Fly   244 LLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDA 308
            |....:...:.|:..|.||..:.|                        .:.|.|:|..:     .
Mouse   402 LPVPVIVSNFSRIYHQNQRADKRR------------------------AQQKVRLARIR-----L 437

  Fly   309 ANSETSLNDCLEYGQKGKLPPDKKEGDA---CQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSG 370
            |.|.|: |..|:|.|.|.| .|...||.   |...|:...|||                      
Mouse   438 AKSGTT-NAFLQYKQNGGL-EDSGSGDGQMLCVRSRSAFEQQH---------------------- 478

  Fly   371 SALLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAP 435
                                       ||.:                             :|...
Mouse   479 ---------------------------HHLL-----------------------------HCLEK 487

  Fly   436 ATA---TIYFPFGHAPSAPGSPAHNQAHPTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRV 497
            .|.   |....|..|..|            .:..|....:|::.|||:.. .::.....|.:...
Mouse   488 TTCHEFTDELTFSEALGA------------VSLGGRTSRSTSVSSQPMGP-GSLFSSCCSRRVNR 539

  Fly   498 LASGLQDATAVNLVTASEASTSTLEAIT-LPPPPAYQTASVHAVRRAKFVAKPLPQEINALMDCG 561
            .|..|.::||    :.|..|...|:.:. |...||.||       |:...|||     :..:|..
Mouse   540 RAIRLANSTA----SVSRGSMQELDTLAGLRRSPAPQT-------RSSLNAKP-----HDSLDLN 588

  Fly   562 TGSPDLSGRHDLLPPPHSGSPATGTAASPLLTYTAAATSPQLSAGIKGGSGPAP-------TAGA 619
            ..|.|.......:|.|.:.:|.....:||             |.|  ||||..|       :.|.
Mouse   589 CDSRDFVAAIISIPTPPANTPDESQPSSP-------------SGG--GGSGGTPNTTLRNSSLGT 638

  Fly   620 PMLV 623
            |.|:
Mouse   639 PCLL 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 20/67 (30%)
Ion_trans_2 822..896 CDD:462301
Kcnd1NP_032449.1 Interaction with KCNIP1, KCNIP2, and other family members. /evidence=ECO:0000250|UniProtKB:Q63881 2..20
BTB_POZ 6..143 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..164
Ion_trans 185..417 CDD:459842 21/79 (27%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 2/4 (50%)
DUF3399 470..550 CDD:463381 22/174 (13%)
Required for dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 474..489 6/92 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..585 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 601..651 15/57 (26%)
Blue background indicates that the domain is not in the aligned region.

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