DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnc3

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_036008594.1 Gene:Kcnc3 / 16504 MGIID:96669 Length:807 Species:Mus musculus


Alignment Length:222 Identity:49/222 - (22%)
Similarity:70/222 - (31%) Gaps:72/222 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 RRAKFVAKPLPQEINALMDCGTGSPDLSGRHDLLPP----PHSGSPATGTAASPLLTYTAAATSP 601
            ::.|.:.:| ||         .|||:.. :.|..||    ||.||  .|.:..|.:      |.|
Mouse   559 KKNKHIPRP-PQ---------PGSPNYC-KPDPPPPPPPHPHHGS--GGISPPPPI------TPP 604

  Fly   602 QLSAGIKGGSGPAPTAGAPMLVSGAGRGAAALTDNGFMAAGVCGMGAAAAPLPVTSMGAATTTAS 666
            .:...:.|...|.|.....:|..|||         |....|:..:.|...|.|:.......|  :
Mouse   605 SMGVNVAGAYPPGPHTHPGLLRGGAG---------GLGIMGLPPLPAPGEPCPLAQEEVIET--N 658

  Fly   667 SAASTLSALLSANSTGNVDIMEDEDEQERERLSNCPHGTPSRV-------PLIASPLSVPQDSGE 724
            .|.|.|..|                   .|.:...|:|.|:..       |.|..|...|:|   
Mouse   659 RAGSDLGVL-------------------EEGVDPRPNGDPAAAALAHEDCPAIDQPAMSPED--- 701

  Fly   725 NTTRNTAFNRHTLQPLSRKTLLLTRRC 751
                     :..:.|.||......|.|
Mouse   702 ---------KSPITPGSRGRYSRDRAC 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301
Kcnc3XP_036008594.1 BTB_KCNC1_3 91..204 CDD:349721
Ion_trans 290..551 CDD:459842
Blue background indicates that the domain is not in the aligned region.

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