DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnb1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_032446.2 Gene:Kcnb1 / 16500 MGIID:96666 Length:857 Species:Mus musculus


Alignment Length:538 Identity:103/538 - (19%)
Similarity:180/538 - (33%) Gaps:157/538 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 DAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADG 248
            |..|::..|...:..::...:||:|:|.:.|:|..||:......:.||.::.:.:..:       
Mouse   355 DEDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPII------- 412

  Fly   249 LQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDA-ANSE 312
                 |....:..:.|:.:.|:.              :.::..:|:||..:.......|| |.|.
Mouse   413 -----VNNFSEFYKEQKRQEKAI--------------KRREALERAKRNGSIVSMNMKDAFARSI 458

  Fly   313 TSLNDCLEYGQKGKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSGS---ALL 374
            ..::..:|...:|....||.:.:      :|:|.:..:.::............|...||   |..
Mouse   459 EMMDIVVEKNGEGVAKKDKVQDN------HLSPNKWKWTKRALSETSSSKSFETKEQGSPEKARS 517

  Fly   375 KYAPQQQQLQQQQQL-----STATLPRQHHQMQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYA 434
            ..:||...:||.|.:     .|.:.|..:.:....|.|.|.:....::||.:..:|.........
Mouse   518 SSSPQHLNVQQLQDMYSKMAKTQSQPILNTKEMAPQSQPQEELEMGSMPSPVAPLPTRTEGVIDM 582

  Fly   435 PATATI--------YFP----FGHAPSAP------GSPAHNQAHPTQNPNG--NALGNTTLGSQP 479
            .:.::|        .||    |.|:|.|.      ||.|     |.....|  .|.|...:.:.|
Mouse   583 RSMSSIDSFISCATDFPEATRFSHSPLASLSGKSGGSTA-----PEVGWRGALGASGGRLMETNP 642

  Fly   480 L----------------VKYHT----------------IHLQPASGKHR----------VLASGL 502
            :                :|.|.                ..|.||.|.:.          ...:||
Mouse   643 IPEASRSGFFVESPRSSMKTHNPMKLRALKVNFLEGDPTPLLPALGLYHDPLRNRGGAAAAVAGL 707

  Fly   503 QDATAVNLVTASEAST--STLEAITLPPPPAYQTASVHAVRRAKFVAKPLPQEINALMDCGTGSP 565
            :.|:.::....|..|:  :|..|.|.|..|...||          :|......::..:|..|   
Mouse   708 ECASLLDKPVLSPESSIYTTASARTPPRSPEKHTA----------IAFNFEAGVHQYIDTDT--- 759

  Fly   566 DLSGRHDLLPPPHSGSPATGTAASPLLTYTAAATSPQLSAGIKG-----GSGPAPTA-------- 617
            |..|:  ||....|..|.:          ...:|||:.|.|.:.     .|.|.||:        
Mouse   760 DDEGQ--LLYSVDSSPPKS----------LHGSTSPKFSLGARTEKNHFESSPLPTSPKFLRPNC 812

  Fly   618 -----GAPMLVSGAGRGA 630
                 |.|    |.|.||
Mouse   813 VYASEGLP----GKGPGA 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 13/62 (21%)
Ion_trans_2 822..896 CDD:462301
Kcnb1NP_032446.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
BTB_POZ_KCNB2 15..141 CDD:349719
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 59..75
Ion_trans 188..424 CDD:459842 14/80 (18%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 377..382 2/4 (50%)
Self-association. /evidence=ECO:0000250|UniProtKB:P15387 448..481 8/32 (25%)
Kv2channel 467..678 CDD:397541 39/221 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..569 20/99 (20%)
FFAT. /evidence=ECO:0000250|UniProtKB:Q14721 590..596 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..627 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 768..802 9/43 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 816..857 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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