DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnb2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_446452.2 Gene:Kcnb2 / 117105 RGDID:621349 Length:907 Species:Rattus norvegicus


Alignment Length:802 Identity:155/802 - (19%)
Similarity:256/802 - (31%) Gaps:247/802 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLE-----APQDISKSAAIAK-- 111
            |..||.||:......::.:||    :||..|..|:  ..|..|.|     .|.|..|.|.:..  
  Rat   182 LLEKPNSSVAAKILAIVSILF----IVLSTIALSL--NTLPELQENDEFGQPSDNRKLAHVEAVC 240

  Fly   112 ----SREDCLREL-----W-IITEKLNV--------------LYERNWTMLVHEQLRR----FEG 148
                :.|..||.|     | .....|||              |.|.|.::|..:.:||    |..
  Rat   241 IAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRI 305

  Fly   149 SIVAATRQGSAGSSGGGGAGLFHEGSASALG-----------------HFGYDAGDSQSWSFSEA 196
            ..:....:.:..|:|....|.....|.:.||                 .|.....|:..::...|
  Rat   306 MRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPA 370

  Fly   197 LLYSVTV-ITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQL 260
            ..:..|: :||:|:|.:.|:|..||:......:.||.::.:.:    .::.:.....|     :.
  Rat   371 SFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPI----PIIVNNFSEFY-----KE 426

  Fly   261 QRHQEHRRKSTPGTSTPSAS-SAANSREKDTDKRSKRRMANCKGCQYDAANSETSLNDCLEYGQK 324
            |:.||...|..........: |..:...||...||...:........::||.:.|::|       
  Rat   427 QKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANIKDSVDD------- 484

  Fly   325 GKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSGSALLKYAPQQQQLQQQQQL 389
            ..|.|.:.:. |.:.|...:..:.:..:.|:..|:.....:..||.|     :||....|:.:.|
  Rat   485 NHLSPSRWKW-ARKALSETSSNKSYENKYQEVSQKDSHEQLNNTSSS-----SPQHLSAQKLEML 543

  Fly   390 ---STATLPRQHHQMQLQQQ-------QQQLQQNFVAVPSSMLR---------MPLTVPPNCYAP 435
               .|.|....|.....|:|       :::::...|..|...|.         |..|...:.:. 
  Rat   544 YNEITKTQTHSHPNPDCQEQPERPSAYEEEIEMEEVVCPQEQLAVAQTEVIVDMKSTSSIDSFT- 607

  Fly   436 ATATIYFPFGHAPSAPGSPAHNQAHPTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRVLAS 500
            :.||.:.....:|..|.|.:|.|                      :|:.|.  .|...:|     
  Rat   608 SCATDFTETERSPLPPPSASHLQ----------------------MKFPTD--LPGMDEH----- 643

  Fly   501 GLQDATAVNLVTASEASTSTLEAITLPPPPAYQTASVHAVRRAKFVAKPLPQEINALMDCGTGSP 565
              |...|...:|.|...          .|.|.:.|..:|           |.:|...:|.|..  
  Rat   644 --QRVRAPPFLTLSRDK----------GPAAREAALDYA-----------PIDITVNLDAGAS-- 683

  Fly   566 DLSGRHDLLPPPHSGSPATGTAASPLLTYTAAATSPQLSAGIKGGSGPAPTAGAPMLVS-GAGRG 629
                 |..|.|                  .:|:.||:.|  :||.:   |.....:.|: ...||
  Rat   684 -----HGPLQP------------------DSASDSPKSS--LKGSN---PLKSRSLKVNFQENRG 720

  Fly   630 AAALTDNGFMAAGVCGMGAAAAPLPVTSMGAATTTASSAASTL-------------SALLSANST 681
            :|..|.           .:.|.|||||:.....||....::.|             .|.:||:..
  Rat   721 SAPQTP-----------PSTARPLPVTTADFPLTTPQHMSTILLEEALPQGQRPLPGADVSAHCQ 774

  Fly   682 G--------------------------NVDIMEDED---------EQERERLSNCPHGTPSRVPL 711
            |                          .:|..||||         :::.:...||....|...  
  Rat   775 GPSKGLSPRVPKQKLFPFSSRERRSFTEIDTGEDEDFLDLQRPRPDKQADPSPNCLADKPGEA-- 837

  Fly   712 IASPLSVPQDSGENTTRNTAFN 733
             ..||......|.::.:||..|
  Rat   838 -RDPLREEGCVGSSSPQNTDHN 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 16/87 (18%)
Ion_trans_2 822..896 CDD:462301
Kcnb2NP_446452.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 49/250 (20%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 381..386 2/4 (50%)
Kv2channel 471..755 CDD:397541 74/390 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..534 6/35 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 550..570 4/19 (21%)
FFAT. /evidence=ECO:0000250|UniProtKB:Q92953 605..611 0/6 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..860 43/223 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 884..907
Blue background indicates that the domain is not in the aligned region.

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