DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcns1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_446406.1 Gene:Kcns1 / 117023 RGDID:621524 Length:497 Species:Rattus norvegicus


Alignment Length:389 Identity:80/389 - (20%)
Similarity:121/389 - (31%) Gaps:160/389 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PSQLDCSIDDETDATEFGGLGGVGGAGCGSEMGAKTTASLTAKPRSSLRRCC-------GHLL-K 71
            ||.:|...|:.:|...  .|...|.|.||                 .|||..       |:.| .
  Rat   143 PSSVDPCPDEISDVQR--ELARYGAARCG-----------------RLRRRLWLTMENPGYSLPS 188

  Fly    72 LLFS--TPGLVLLVIGYSVLGGLLFPLLEAPQDISKSAAIA--KSRED-----CLREL------W 121
            .|||  :.|:||..|....:..|  |..:|.:..:..||:|  :|.||     .||.|      |
  Rat   189 KLFSCVSIGVVLASIAAMCIHSL--PEYQAREAAAAVAAVAAGRSAEDVRDDPVLRRLEYFCIAW 251

  Fly   122 IITEKLNVLYERNWTMLVHEQLRRF---------------------EGSIVAATRQGSAGSSGGG 165
            .       .:|.:..:|:....|.|                     .|:.: ..|:|::|...|.
  Rat   252 F-------SFEVSSRLLLAPSTRNFFCHPLNLIDIVSVLPFYLTLLAGAAL-GDRRGASGEELGD 308

  Fly   166 -----------------------------GAGLFHE-------------GSASALG--------H 180
                                         ||.|.|.             |.:...|        :
  Rat   309 LGKVVQVFRLMRIFRVLKLARHSTGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAEEKN 373

  Fly   181 FGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSL---- 241
            .|:|...:..|       :....:||:|:|.:.|.|.|||||.....|.|:.::.:.::.:    
  Rat   374 VGFDTIPACWW-------WGTVSMTTVGYGDVVPETVAGKLAASGCILGGILVVALPITIIFNKF 431

  Fly   242 -----------GALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTDKRS 294
                       .|:.:.|            ||..|....|..|.|..|..:   |||...:.||
  Rat   432 SHFYRRQKALEAAVRSSG------------QREFEDLLSSVDGVSDVSLET---SRETSQEGRS 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 18/92 (20%)
Ion_trans_2 822..896 CDD:462301
Kcns1NP_446406.1 BTB_POZ 21..126 CDD:453885
Ion_trans 188..439 CDD:459842 51/267 (19%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 392..397 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..497 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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