DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and Kcnk4

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_006230696.1 Gene:Kcnk4 / 116489 RGDID:621449 Length:423 Species:Rattus norvegicus


Alignment Length:213 Identity:60/213 - (28%)
Similarity:90/213 - (42%) Gaps:55/213 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GAGCGSEMG-AKTTASLTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEAPQD 102
            |:|.|...| |..:.:|.|                      |:.||:.|.|.|.|:|..||.|.:
  Rat    16 GSGAGPAPGRAMRSTTLLA----------------------LLALVLLYLVSGALVFQALEQPHE 58

  Fly   103 ISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVHEQLRRFEGSIVAATRQGSAGSSGGGGA 167
            ......:...|:..|::...:::| |:   ..:..||.|.|                    ||||
  Rat    59 QQVQKDLEDGRDQFLKDHPCVSQK-NL---EGFIKLVAEAL--------------------GGGA 99

  Fly   168 GLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVP 232
            ......:.|        :..|.:|:...|..:|.|:|||||:|::...|.||:|..|||||||:|
  Rat   100 NPETSWTNS--------SNHSSAWNLGSAFFFSGTIITTIGYGNIALHTDAGRLFCIFYALVGIP 156

  Fly   233 LMLMCLSSLGALLADGLQ 250
            |..|.|:.:|..|...|:
  Rat   157 LFGMLLAGVGDRLGSSLR 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 28/69 (41%)
Ion_trans_2 822..896 CDD:462301
Kcnk4XP_006230696.1 Ion_trans_2 <111..169 CDD:462301 27/57 (47%)
Ion_trans_2 207..285 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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