DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnd2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_012815411.2 Gene:kcnd2 / 105946842 XenbaseID:XB-GENE-952449 Length:627 Species:Xenopus tropicalis


Alignment Length:575 Identity:113/575 - (19%)
Similarity:178/575 - (30%) Gaps:207/575 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 CGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLF---STPGLVLLVIGYSVLGGLLFPLLEAPQDI 103
            ||...|     ||...|       ||....|.|   .|..:::..:.|      |..|:.||   
 Frog   208 CGISPG-----SLRELP-------CGERYALAFFCLDTACVMIFTVEY------LLRLVAAP--- 251

  Fly   104 SKSAAIAKSREDCLRELWIITEKLNVL-YERNWTMLVHEQ-------LRRFEGSIVAATRQGSAG 160
                    ||...:|.:..|.:.:.:: |.....|..:|.       ||.|.   |....:.|..
 Frog   252 --------SRYRFVRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFR---VFRIFKFSRH 305

  Fly   161 SSGGGGAGLFHEGSASALGH----------------FGYDAG--DSQSWSFSEALLYSVTVITTI 207
            |.|....|...:..||.||.                |..:.|  :|:..|...|..|::..:||:
 Frog   306 SQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSLNSRFTSIPAAFWYTIVTMTTL 370

  Fly   208 GHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTP 272
            |:|.:.|:|.|||:.....:|.||.::        ||....:...:.|:..|.||..:.|     
 Frog   371 GYGDMVPKTIAGKIFGSICSLSGVLVI--------ALPVPVIVSNFSRIYHQNQRADKRR----- 422

  Fly   273 GTSTPSASSAANSREKDTDKRSKRRMANCKGCQYDAANS--ETSLNDCLEYGQKGKLPPDKKEGD 335
                               .:.|.|:|..:..:..:||:  ::..|..|....:|          
 Frog   423 -------------------AQKKTRLARIRLAKSGSANAYLQSKRNGLLNEALQG---------- 458

  Fly   336 ACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSGSALLKYAPQQQQLQQQQQLSTATLPRQHHQ 400
                           ..:::||       :.:.|||                     |...|||.
 Frog   459 ---------------SSEEEQP-------LVSKSGS---------------------TFATQHHH 480

  Fly   401 MQLQQQQQQLQQNFVAVPSSMLRMPLTVPPNCYAPATATIYFPFGHAPSAPGSP-----AHNQAH 460
            : |...::.....||.        ..|...||...:|....    |:||.....     :.....
 Frog   481 L-LHCLEKTTNHEFVD--------EQTFEDNCMEVSTINKL----HSPSLSSQNNSFCCSRRNRK 532

  Fly   461 PTQNPNGNALGNTTLGSQPLVKYHTIHLQPASGKHRVLASGLQDATAVNLVTASEA----STSTL 521
            ..:.||.||                    |...:|    ..||:.:|:.:.....|    |.|:|
 Frog   533 NVRIPNANA--------------------PTCSQH----ESLQELSAIQIQCMERATLSNSRSSL 573

  Fly   522 EA-----ITLPPPPAYQTASVHAVRRAKFVAKPLPQEINALMDCGTGSPDLSGRH 571
            .|     :.|.....|.|.:|        ::.|.|.......|..:.|||.|.|:
 Frog   574 NAKVEGNVKLNCEQPYVTTAV--------ISIPTPPMTTPEEDGRSESPDYSQRN 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 22/87 (25%)
Ion_trans_2 822..896 CDD:462301
kcnd2XP_012815411.2 BTB_POZ 6..144 CDD:453885
Ion_trans 183..414 CDD:459842 56/245 (23%)
DUF3399 470..542 CDD:463381 21/125 (17%)
Blue background indicates that the domain is not in the aligned region.

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