DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

powered by:

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1688 and kcnv2

DIOPT Version :10

Sequence 1:	NP_610516.1	Gene:	CG1688 / 36005	FlyBaseID:	FBgn0027589	Length:	918	Species:	Drosophila melanogaster
Sequence 2:	XP_002934230.1	Gene:	kcnv2 / 100498412	XenbaseID:	XB-GENE-940169	Length:	562	Species:	Xenopus tropicalis

Alignment Length:	17	Identity:	6/17 - (35%)
Similarity:	11/17 - (64%)	Gaps:	0/17 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    87 SLAVLQQHQQQQQVGYM 103
            |:||:......:|:||:
Frog   190 SIAVILPLALMKQLGYL 206

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1688	NP_610516.1	Ion_trans_2	177..247	CDD:462301
CG1688	NP_610516.1	Ion_trans_2	822..896	CDD:462301
kcnv2	XP_002934230.1	BTB_POZ_KCNV2	110..217	CDD:349732	6/17 (35%)
kcnv2	XP_002934230.1	Ion_trans	269..520	CDD:459842
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.