DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnc1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_031756512.1 Gene:kcnc1 / 100497402 XenbaseID:XB-GENE-996920 Length:644 Species:Xenopus tropicalis


Alignment Length:456 Identity:84/456 - (18%)
Similarity:143/456 - (31%) Gaps:187/456 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 NALMDCGTGSPDL----SGRHDLLPPPHSGSPATGTA-ASPLLTYTAAATS-----PQLSAGIKG 609
            :|.|:.|.|....    :||...:.....|:|...|. .|..:.|.|..::     ...||.::.
 Frog   122 SAYMEYGAGGSAYMEYGAGRSAYMEYGAGGAPIWNTGPGSAYMEYRAGRSAYMEYGAGRSAYMEY 186

  Fly   610 GSGPAP-----TAGAPMLVSGAG----------------RGAA----ALTDNGFMAAGVCGMGAA 649
            |:|.||     ..|||:..:|.|                ||..    .:........|:.|.|:|
 Frog   187 GAGGAPIWNTGPGGAPIWNTGPGERLYGIRWREERLYGIRGRRERLYGVWGREERLYGIRGRGSA 251

  Fly   650 -AAPLPVTSMGAA---------TTTASSAASTLSALLSANST---GNVDIMEDEDEQERE----- 696
             .||||...:..|         ||.......|.:.:::...|   ||...:....|.|.|     
 Frog   252 YMAPLPFQYVAFASLFFILVSITTFCLETHETFNPIVNKTETEVVGNETQLRFYRESETEAFLTY 316

  Fly   697 ---------------RLSNCPHGTPSRVPLIASPLSVPQ---------DSGENTTRNTAFNRHTL 737
                           |::.|    |::|..|.:.|::..         :.|             |
 Frog   317 IEGVCVVWFTFEFLMRITFC----PNKVEFIKNTLNIIDFVAILPFYLEVG-------------L 364

  Fly   738 QPLSRKT---------------LLLTRRCHRHASGTLYDSTANNTETSDDEEYMQHGSEQFVLKK 787
            ..||.|.               :|...:..||..|.   ....:|..:...|:            
 Frog   365 SGLSSKAAKDVLGFLRVVRFVRILRIFKLTRHFVGL---RVLGHTLRASTNEF------------ 414

  Fly   788 LRYHCDGKDCREAEDSEEEDEKADGRQVPISLVLLILASYICVGTVIFAL--------------- 837
                                              |:|..::.:|.:|||.               
 Frog   415 ----------------------------------LLLIIFLALGVLIFATMIYYAERIGANPNDP 445

  Fly   838 -------WENWSLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQLYACCAYLLLGLVLVAMSFSI 895
                   ::|..:  |.::..||::|:||||..| ::::|  :.:.|.||  |.|::.:||...:
 Frog   446 SASEHTQFKNIPI--GFWWAVVTMTTLGYGDMYP-KTWSG--MLVGALCA--LAGVLTIAMPVPV 503

  Fly   896 L 896
            :
 Frog   504 I 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 24/95 (25%)
kcnc1XP_031756512.1 Ion_trans 259..516 CDD:459842 51/319 (16%)
Blue background indicates that the domain is not in the aligned region.

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