DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_031752644.1 Gene:kcna2 / 100496794 XenbaseID:XB-GENE-991578 Length:499 Species:Xenopus tropicalis


Alignment Length:158 Identity:39/158 - (24%)
Similarity:62/158 - (39%) Gaps:35/158 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVG 230
            |..||    :||:.....|..|||..|..:|..::|..:||:|:|.:.|.|..||:.....|:.|
 Frog   338 GVILF----SSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAG 398

  Fly   231 VPLMLMCLSSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTP------------SASSAA 283
            |    :.::....::.......|.|     :...|.:.:....||.|            |||:.:
 Frog   399 V----LTIALPVPVIVSNFNYFYHR-----ETEGEEQAQYLQVTSCPKIPSSPDLQKSRSASTLS 454

  Fly   284 NS---------REKDTDKRSKR-RMANC 301
            .|         ...:.|.|.|. :.|||
 Frog   455 KSDYMEIQEGVNHSNEDFREKNLKTANC 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 19/69 (28%)
Ion_trans_2 822..896 CDD:462301
kcna2XP_031752644.1 BTB_POZ 33..159 CDD:453885
Ion_trans 162..420 CDD:459842 25/94 (27%)
Blue background indicates that the domain is not in the aligned region.

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