DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcna4

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_004913509.1 Gene:kcna4 / 100495646 XenbaseID:XB-GENE-492827 Length:688 Species:Xenopus tropicalis


Alignment Length:187 Identity:45/187 - (24%)
Similarity:57/187 - (30%) Gaps:65/187 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 SGAGRGAAALTDNGFMAAGVCGMGAAAAPLPVTSMGAATTTASSAASTLSALLSANSTGNVDIME 688
            |.|...|||..:.|....|.| .||..||....:.||.                    ||.....
 Frog    35 SRAAAAAAAAGEGGNSGGGAC-QGAGRAPATQGNSGAG--------------------GNARRAP 78

  Fly   689 DEDEQERERLSNCPHGTPSRV-PLIASPLSVPQDSGENTTRNTAFNRHTLQPLSRKTLLLTRRCH 752
            ...||:.|:.:........|. ||          ||.|..|    :||:             .|.
 Frog    79 QSQEQQEEKSAQRKRSARRRYWPL----------SGCNRWR----SRHS-------------ECS 116

  Fly   753 RHASGTLYDSTANNTETSDDEEYMQHGSEQFVLKKLRYHCDGKDCREAEDSEEEDEK 809
            ..|.|   .......|.:...|....|||:.:||:             |.|||||:|
 Frog   117 GGAGG---GRAGGEEEGTFPSELGPCGSEEMMLKE-------------EVSEEEDQK 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301
kcna4XP_004913509.1 K_channel_TID 1..83 CDD:429748 16/68 (24%)
BTB_POZ 193..319 CDD:453885
Ion_trans 322..605 CDD:459842
Blue background indicates that the domain is not in the aligned region.

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