DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcns1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_002938059.3 Gene:kcns1 / 100492665 XenbaseID:XB-GENE-6051189 Length:451 Species:Xenopus tropicalis


Alignment Length:87 Identity:21/87 - (24%)
Similarity:38/87 - (43%) Gaps:20/87 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RKLSKLEVIQ--NVIDYICELQNA--LDSHPAVNSFDSLAVLQQHQQQQQVGYMVESIDTVPAHP 114
            :|..|::.:|  .:.:|.....:|  ||    :||..|.|.            .|.:::.||...
 Frog   314 KKYYKVDCVQFEEMTEYYAPFCSAKQLD----INSQPSTAT------------TVAAVNGVPNAS 362

  Fly   115 AAAASRQPLATILSSGSNVAAS 136
            .:..:...||||.||.::.|::
 Frog   363 PSMTTVSSLATIDSSNADNAST 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301
kcns1XP_002938059.3 BTB_POZ_KCNS1 18..123 CDD:349733
Ion_trans 185..420 CDD:459842 21/87 (24%)
Blue background indicates that the domain is not in the aligned region.

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