DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnb2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_002937117.3 Gene:kcnb2 / 100489419 XenbaseID:XB-GENE-989392 Length:901 Species:Xenopus tropicalis


Alignment Length:631 Identity:115/631 - (18%)
Similarity:206/631 - (32%) Gaps:197/631 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LTAKPRSSLRRCCGHLLKLLFSTPGLVLLVIGYSVLGGLLFPLLEA-----PQDISKSAAIAK-- 111
            |..||.||:......::.:||    :||..|..|:  ..|..|.|.     |.|..:.|.:..  
 Frog   182 LLEKPNSSVAAKILAIISILF----IVLSTIALSL--NTLPDLQETDEFGQPNDNPQLAHVEAVC 240

  Fly   112 ----SREDCLREL-----W-IITEKLNV--------------LYERNWTMLVHEQLRR----FEG 148
                :.|..||.|     | .....||:              |.|.|.::|..:.:||    |..
 Frog   241 IAWFTMEYLLRFLSSPNKWKFFKGPLNIIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRI 305

  Fly   149 SIVAATRQGSAGSSGGGGAGLFHEGSASALG-----------------HFGYDAGDSQSWSFSEA 196
            ..:....:.:..|:|....|.....|.:.||                 .|.....|:..::...|
 Frog   306 MRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPA 370

  Fly   197 LLYSVTV-ITTIGHGSLTPRTAAGK-------LATIFYALVGVPLMLMCLSSL------------ 241
            ..:..|: :||:|:|.:.|:|..||       :|.:....:.:|:::...|..            
 Frog   371 SFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIK 435

  Fly   242 -----------GALLADGLQCTYVRLCCQLQRHQEHRRKSTPGTSTPSASSAANSREKDTD---- 291
                       |::::..|:..:.|   .::.......||..|         :|..||.:|    
 Frog   436 RREALERAKRNGSIVSMNLKDAFAR---SMELIDVVVDKSADG---------SNKMEKPSDNHLS 488

  Fly   292 ----KRSKRRMANCKGCQYDAANSETSLNDCLE--YGQKGKLPPDKKEGDACQLLRNLNPQ--QH 348
                |.|:|.:            ||||.|...:  |.:..:....::..:|....::|:.|  :.
 Frog   489 PSRWKWSRRTL------------SETSSNKSFDNKYQEVSQHDSQEQLNNASSSPQHLSAQKLEE 541

  Fly   349 FYQQQQQQPQQPDVMLMTTTSGSALLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQLQQN 413
            .|.:..:....|.|    .:|........|..::..:.:::||       .:.||...|:.:..:
 Frog   542 LYNEITKAQSHPSV----NSSFQEQAAVPPAYEEEIEMEEVST-------KKTQLSVAQKDIVTD 595

  Fly   414 FVAVPS------------SMLRMPLTVPPNCYAPATATIYFP----------------------F 444
            ..:|.|            ...|.|||.    |..:...|.||                      .
 Frog   596 MRSVSSIDSFASCATDFTETERSPLTP----YPGSNLEIRFPSYTVPEEGHDGNVTQILPRSKYM 656

  Fly   445 GHAP---------------SAPGSP---AHNQA-HPTQNPNGNALGNTTLGSQPLVKYHTIHLQP 490
            |.||               :..|:|   ..:|| :..::|..:...|..|.|:.|    .::.:.
 Frog   657 GFAPKDVTFEYKLSERSNKNDNGTPKILLQDQAGNEVESPECSLRRNNPLRSRSL----KVNFKE 717

  Fly   491 ASGKHRVLASGLQDATAVNLVTASEASTSTLEAITLPPPPAYQTAS 536
            ..|..:...:....|..||::.....:...|..|.|...|:.:..|
 Frog   718 GKGMSQAGPTNFTSALPVNMIDHPLYTHLQLSTIFLRDYPSQEQPS 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 18/117 (15%)
Ion_trans_2 822..896 CDD:462301
kcnb2XP_002937117.3 BTB_POZ_KCNB2 19..145 CDD:349719
Ion_trans 192..428 CDD:459842 47/241 (20%)
Kv2channel 471..755 CDD:397541 58/323 (18%)
Blue background indicates that the domain is not in the aligned region.

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