DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnb1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_031750650.1 Gene:kcnb1 / 100489405 XenbaseID:XB-GENE-982937 Length:875 Species:Xenopus tropicalis


Alignment Length:469 Identity:92/469 - (19%)
Similarity:152/469 - (32%) Gaps:129/469 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 DAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALLADG 248
            |..|::..|...:..::...:||:|:|.:.|:|..||:......:.||.::.:.:    .::.:.
 Frog   355 DEEDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPI----PIIVNN 415

  Fly   249 LQCTYVRLCCQLQRHQEHRRKSTPGTSTPSAS-SAANSREKDTDKRSKRRMANCKGCQYDAANSE 312
            ....|     :.|:.||...|..........: |..:...||...||...|        |....:
 Frog   416 FSEFY-----KEQKRQEKAIKRREALERAKRNGSIVSMNMKDAFARSVELM--------DVVVEK 467

  Fly   313 TSLNDCLEYGQKGK-----LPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLMTTTSGSA 372
            |..|.    |:|.|     |.|.:.:... :.|...:..:.|..::|..|::            |
 Frog   468 TDDNS----GRKDKVQDNHLSPSRWKWTK-RTLSETSSNKSFDAKEQGSPEK------------A 515

  Fly   373 LLKYAPQQQQLQQQQQLSTATLPRQHHQMQLQQQQQQL---QQNFVAVPSSMLRMPLTVPPNCYA 434
            ....:||...:||.:.:        :::|...|.|..|   ..|..:.|:..|.|.....|....
 Frog   516 RCSSSPQHLNVQQLEDI--------YNKMAKTQSQPVLNSKDSNQPSKPAEELEMEAIPGPTVPM 572

  Fly   435 PAT-------------------ATIYFP----FGHAPSA---------PG-SPAHNQAHPTQNPN 466
            .||                   .|..||    |.|:|.|         || :.:|........|.
 Frog   573 LATHREGIIDMRSMSSIDSFISCTAEFPETGRFSHSPLAILPYKININPGQNTSHGYKQSRDRPL 637

  Fly   467 GNALGNTTLGSQP----LVKYHTIHLQPASGKHRVLASGLQDATAVNLVTASEASTSTLEAITLP 527
            .:.:...:....|    |.::.|..|:......:|....:..:..||.:   |..|.||    ||
 Frog   638 SSDVSRESFTEIPPKTDLGRHSTFILESPKSLVKVKNPLMLRSLKVNFL---EGDTGTL----LP 695

  Fly   528 PPPAYQTASVHAVRRAKFVAKPLPQEINALMDCGTGSPDLS--GRHDLLPPPHSGSPATGTAASP 590
            .|....:.| |                   |..|....|.|  ..|.:..|..|           
 Frog   696 APNVLSSTS-H-------------------MQEGPSKLDTSFMSEHSVRSPETS----------- 729

  Fly   591 LLTYTAAATSPQLS 604
             |..||:|.:|..|
 Frog   730 -LYTTASARTPSKS 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 13/62 (21%)
Ion_trans_2 822..896 CDD:462301
kcnb1XP_031750650.1 BTB_POZ_KCNB2 15..141 CDD:349719
Ion_trans 188..424 CDD:459842 14/77 (18%)
Kv2channel 467..720 CDD:397541 58/304 (19%)
Blue background indicates that the domain is not in the aligned region.

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