DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and kcnv1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_002939028.1 Gene:kcnv1 / 100487006 XenbaseID:XB-GENE-956997 Length:503 Species:Xenopus tropicalis


Alignment Length:355 Identity:75/355 - (21%)
Similarity:127/355 - (35%) Gaps:69/355 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KQPQPSQLDCSIDDETDATEFGGLGGVGGAGCGSEMGAKTTASLTAKPRSSLRRCCGHLLKLLFS 75
            |:.....||...|:|....|.....||     ..|...:|...:..||.||:.......|.:.|.
 Frog   167 KKLMSESLDIKKDEEEIEAEEEDFSGV-----VFEHFRQTLWDILEKPGSSVAAKTFGTLSMTFI 226

  Fly    76 TPGLVLLVIGYSVLGGLLFPLLEAPQ---------DISKSAAIAKSREDCLRELWIITEKLNVLY 131
            ...:..:|:..|.:..:..|||.|.:         :::......|.:...||.:..|.:.:.:| 
 Frog   227 VISIANMVLISSEMNSIDPPLLNALEYICITWFTLELALRFLCVKHKCRFLRSVVNIIDIVAIL- 290

  Fly   132 ERNWTMLVHEQL----RRFE--GSIVAATR-----------QGSAGSSGGG-------------- 165
             ..:..|:.|.|    ...|  |.||.:.|           :.|.|....|              
 Frog   291 -PFYITLIVENLYGESTELENVGRIVQSLRLLRSLRMLKLGRHSTGLKSLGMTIAQCYEEVGLLL 354

  Fly   166 -----GAGLFHEGSASALGH-FGYDAGDSQSWSFSEALLYSVTVITTIGHGSLTPRTAAGKLATI 224
                 |..:|     |||.: ..::..|:...|...|..::.|.:||:|:|.:.|.|..||:...
 Frog   355 LFLSVGISIF-----SALEYAVEHNIPDTTFTSVPNAWWWATTSMTTVGYGDIRPDTTFGKIVAF 414

  Fly   225 FYALVGVPLMLMCLSSLGALLADGLQCTYVRLCCQ--LQRHQEHRRKSTPGTSTPSASSAANSRE 287
            ...|.|:.::.:.:    |::.|.....|..|..:  ..|.:|..:|.....   ||.|..|...
 Frog   415 LCILSGILVLALPI----AIINDRFAACYFTLKIKEAALRQREALKKLMKNI---SAESDTNVNL 472

  Fly   288 KDTDKRSKRRMANCKGCQYDAANSETSLND 317
            :|...:|...|...|  ..:.|::.:|..|
 Frog   473 RDIYAKSVMEMLRLK--SRERASTRSSGGD 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 17/70 (24%)
Ion_trans_2 822..896 CDD:462301
kcnv1XP_002939028.1 BTB_POZ_KCNV1 61..169 CDD:349731 1/1 (100%)
Ion_trans 215..439 CDD:459842 45/234 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.