DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnf1b

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:XP_005157014.1 Gene:kcnf1b / 100334378 ZFINID:ZDB-GENE-090312-39 Length:484 Species:Danio rerio


Alignment Length:142 Identity:31/142 - (21%)
Similarity:51/142 - (35%) Gaps:33/142 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 GAGLFHEGSASALGHFGYDAGDSQSWSFSEALL--------YSVTVITTIGHGSLTPRTAAGKLA 222
            |.|:|   ..||||:       :...|..|.|.        :::..:||:|:|.:.|:|..|:..
Zfish   330 GVGIF---VFSALGY-------TMEQSHPETLFRSIPQSFWWAIITMTTVGYGDIYPKTTLGRCN 384

  Fly   223 TIFYALVGVPLMLMCL--------------SSLGALLADGLQCTYVRLCCQLQRHQEHRRKSTPG 273
            .....|.||..:.:.:              ..|.......|:...:| ..:|......||...||
Zfish   385 AAISFLCGVIAIALPIHPIINNFVIYYNKQKVLETAAKHELELMELR-ALELTVRSASRRSDAPG 448

  Fly   274 TSTPSASSAANS 285
            .:...|..|:.|
Zfish   449 RAWEGAMRASRS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 17/91 (19%)
Ion_trans_2 822..896 CDD:462301
kcnf1bXP_005157014.1 BTB_POZ_Kv5_KCNF1 22..136 CDD:349690
Ion_trans 179..415 CDD:459842 20/94 (21%)
Blue background indicates that the domain is not in the aligned region.

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