DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1688 and kcnk6

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001120420.1 Gene:kcnk6 / 100145504 XenbaseID:XB-GENE-958681 Length:308 Species:Xenopus tropicalis


Alignment Length:165 Identity:45/165 - (27%)
Similarity:74/165 - (44%) Gaps:39/165 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LVLLVIGYSV---LGGLLFPLLEAPQDISKSAAIAKSREDCLRELWIITEKLNVLYERNWTMLVH 140
            |.|||..|.:   ||.|:..::|:|.:.|....:.:.:...|.|    :..:||           
 Frog     7 LTLLVCAYVIYLLLGALVISVIESPYEASLRDELRQLKSVFLNE----SPCVNV----------- 56

  Fly   141 EQLRRFEGSIVAATRQGSAGSSGGGGAGLFHEGSASALGHFGYDAGDSQSWSFSEALLYSVTVIT 205
            ..|..|...|:.|.:.|                 .|.|    ::|.:...|..:.::.::.|::|
 Frog    57 SSLEAFLEKIINANKYG-----------------VSVL----HNASNDSKWDIASSMFFASTLVT 100

  Fly   206 TIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSS 240
            |:|:|..||.|.:||...|||||:|||..::.|||
 Frog   101 TVGYGYTTPLTDSGKAFCIFYALIGVPFTMLVLSS 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 24/64 (38%)
Ion_trans_2 822..896 CDD:462301
kcnk6NP_001120420.1 Ion_trans_2 76..141 CDD:462301 24/64 (38%)
Ion_trans_2 <194..251 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.