DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnf1

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001096396.1 Gene:kcnf1 / 100124998 XenbaseID:XB-GENE-979363 Length:484 Species:Xenopus tropicalis


Alignment Length:82 Identity:19/82 - (23%)
Similarity:40/82 - (48%) Gaps:20/82 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 ILASYICVGTVIFA-------------LWENWSLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQ 874
            :|..|:.||..:|:             |::  |:....::..:|::|:||||..|..:..    :
 Frog   324 LLLMYLAVGIFVFSALGYTMEQSHPDTLFK--SIPQSFWWAIITMTTVGYGDIYPKTTLG----K 382

  Fly   875 LYACCAYLLLGLVLVAM 891
            |.|..:: |.|::.:|:
 Frog   383 LNAATSF-LCGVIAIAL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301
Ion_trans_2 822..896 CDD:462301 19/82 (23%)
kcnf1NP_001096396.1 BTB_POZ_Kv5_KCNF1 21..136 CDD:349690
Ion_trans 179..415 CDD:459842 19/82 (23%)
Blue background indicates that the domain is not in the aligned region.

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