DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1688 and kcnc2

DIOPT Version :10

Sequence 1:NP_610516.1 Gene:CG1688 / 36005 FlyBaseID:FBgn0027589 Length:918 Species:Drosophila melanogaster
Sequence 2:NP_001429226.1 Gene:kcnc2 / 100037377 ZFINID:ZDB-GENE-070410-118 Length:593 Species:Danio rerio


Alignment Length:197 Identity:42/197 - (21%)
Similarity:76/197 - (38%) Gaps:49/197 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 YSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLM----CLSSLGALLADGLQCTYVRLCCQ 259
            ::|..:||:|:|.:.|:|.:|.:.....||.||..:.|    .:::.|         .|..|...
Zfish   388 WAVVTMTTLGYGDMYPQTWSGMVVGALCALAGVLTIAMPVPVIVNNFG---------MYYSLAMA 443

  Fly   260 LQRHQEHRRKSTP---GTSTP-----SASSAANSREKDTDKRSKRRMANCKGCQYDAANSETSLN 316
            .|:..:.|:|..|   .|.:|     ..|:|.||.:.:.          |.|.........:.|:
Zfish   444 KQKLPKKRKKHIPQAVQTGSPLYCRTDLSTACNSTQGEL----------CIGQSRGLERHRSVLS 498

  Fly   317 -DCLEYGQKGKLPPDKKEGDACQLLRNLNPQQHFYQQQQQQPQQPDVMLM-----TTTSGSALLK 375
             || ..|....:.|:::           .|.:|...::|....:....|:     |.|:.:|:.|
Zfish   499 ADC-SAGSDISMSPEER-----------MPMRHSSVREQDHHTEGTCFLLAPSDYTCTADAAIRK 551

  Fly   376 YA 377
            .|
Zfish   552 TA 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1688NP_610516.1 Ion_trans_2 177..247 CDD:462301 14/51 (27%)
Ion_trans_2 822..896 CDD:462301
kcnc2NP_001429226.1 None
Blue background indicates that the domain is not in the aligned region.

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