DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and YVC1

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_014730.2 Gene:YVC1 / 854255 SGDID:S000005613 Length:675 Species:Saccharomyces cerevisiae


Alignment Length:759 Identity:163/759 - (21%)
Similarity:281/759 - (37%) Gaps:239/759 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 EILRI------LLDRGAAVPV---PHDIRCGCEE-----CVRLTAEDSLRHSLSRVN--IYRALC 215
            :|||:      |:|:  .||:   |:||.|...|     .|:|..|....:...:.|  .|:::.
Yeast    34 QILRVTLNLKYLIDK--VVPIVYDPNDIVCDHSEILSPKVVKLAYEACGGNPKDKANKRKYQSVI 96

  Fly   216 SPSLICLTSNDPIITAFQLS----WELRNLALTEQECK-----SEYMDLRRQCQKFAVDLLDQTR 271
            ..||:.:.....|:...::.    :|.|||| ::|.||     .|..||    |...:.||.:..
Yeast    97 IFSLLKVCEWYSILATMEVHNAKLYETRNLA-SQQLCKLLIEREETRDL----QFLFMQLLLRRY 156

  Fly   272 TSNELAIILNYDPQMSSYEPGDRMSLTRLVQAISYKQKKFVAHSNIQQLLSSIW-----YDGL-- 329
            ..||     |.:.|    ||     |..|..|........:..|..|:.|..||     .:||  
Yeast   157 VINE-----NDEDQ----EP-----LNALELATDMHCTTVIGSSGFQRCLKWIWRGWIVQNGLDP 207

  Fly   330 PGFRRKSIVDKVICIAQ---VAVLFPLYCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFIL 391
            ..|.:...:.:|..|:.   |.:..|:|                    ..:|....|:| ||.:.
Yeast   208 TTFIKDDSLAEVSLISHFNPVRLKAPVY--------------------QNYLQMIFSFL-FLGLY 251

  Fly   392 ILVSQRADDDFVRIFGTTRMKKELAEQELRQRGQTPSKLELIVVMYVIGFVWEEVQEIFAVGMKS 456
            .||....|.:.|:.|                     ..||.|..::..||:.:|:.:::.:|. :
Yeast   252 TLVVNGKDSERVQSF---------------------DLLESIFYVFNTGFILDELTKLYYIGY-A 294

  Fly   457 YLRNMWNFIDFLRNSLYVSVMCLRAFAYIQQATEIARDPQMAYIPREKWHDFDPQLIAEGLFAAA 521
            :| :.||..:.....:....|..||.:.         .|..|....|.|.....::::   .||.
Yeast   295 HL-SFWNLFNDTTYLIITFAMGFRAMSV---------TPLNAKYSSEDWDKISYRVLS---CAAP 346

  Fly   522 NVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFACGLNQLLWYFAALEKSKC 586
            .|:|.| |::|.| ...:|.:.:.|..|:.:.:.|||:..|::..|..|       |..|:.:  
Yeast   347 FVWSRL-LLYLES-QRFIGIMLVILKHMMKESIVFFFLLFLIMIGFTQG-------FLGLDSA-- 400

  Fly   587 YVLPGGEADWGSHGDSCMKWRRFGNLFESSQSLFWASFGMVGLDDFELSGIKSYT-RFWGLLMFG 650
                .|:.|        :.....|||          :..::||..|::  .:.:. .:..:|.:|
Yeast   401 ----DGKRD--------ITGPILGNL----------TITVLGLGSFDV--FEEFAPPYAAILYYG 441

  Fly   651 SYSVINVIVLLNLLIAMMSNSYAMIDEHSDTEWKFARTKLWMSYF----EDSATLP--------- 702
            .|.:::|| |||:|||:.|.:|..:.:::|.|:....::..:.|.    ||....|         
Yeast   442 YYFIVSVI-LLNILIALYSTAYQKVIDNADDEYMALMSQKTLRYIRAPDEDVYVSPLNLIEVFMT 505

  Fly   703 PPFNVLPSVK---------------WVIRIFRKSSKTIDRQRSKKRKE-QEQFSEYD-------- 743
            |.|.:||..:               :::.|..|.::...|.:..:.|. .:..:|||        
Yeast   506 PIFRILPPKRAKDLSYTVMTIVYSPFLLLISVKETREARRIKYNRMKRLNDDANEYDTPWDLTDG 570

  Fly   744 ----------------------NIMRSLVWRYVAA---MHRK---------------FE--NNPV 766
                                  ...|||..:..|.   :|.|               ||  :|..
Yeast   571 YLDDDDGLFSDNRNSGMRATQLKNSRSLKLQRTAEQEDVHFKVPKKWYKNVKKCSPSFEQYDNDD 635

  Fly   767 SEDDINEVKSEIN--TMRYEML-----EIFENSGMDVSSANKKE 803
            :|||..|.|.|:.  |.:.|.|     ::.|.  :|:.  :|||
Yeast   636 TEDDAGEDKDEVKELTKKVENLTAVITDLLEK--LDIK--DKKE 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 156/733 (21%)
ANK 48..195 CDD:238125 13/41 (32%)
ANK repeat 78..114 CDD:293786
ANK repeat 134..177 CDD:293786 5/15 (33%)
TRP_2 187..246 CDD:285535 15/69 (22%)
DUF2031 <706..>805 CDD:299055 32/171 (19%)
YVC1NP_014730.2 Ion_trans 235..470 CDD:395416 68/326 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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