DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trpl and TRPC6

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_004612.2 Gene:TRPC6 / 7225 HGNCID:12338 Length:931 Species:Homo sapiens


Alignment Length:841 Identity:291/841 - (34%)
Similarity:452/841 - (53%) Gaps:126/841 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LLLEEKKFLLAVERGDMPNVRRILQKALRHQHININCMDPLGRRALTLAIDNENLEMVELLVVMG 102
            |.:||::||.|.|.|::|.||::|::.   ..:|:||:|.:|:.||.||:.||:||:.|||:...
Human    95 LSIEEERFLDAAEYGNIPVVRKMLEEC---HSLNVNCVDYMGQNALQLAVANEHLEITELLLKKE 156

  Fly   103 VETK--DALLHAINAEFVEAVELLLEHEELIYKEGEPYS------------WQKVDINTAMFAPD 153
            ..::  ||||.||:..:|..||.:|.|.  .:.||:..:            :...|.:...|:.|
Human   157 NLSRVGDALLLAISKGYVRIVEAILSHP--AFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHD 219

  Fly   154 ITPLMLAAHKNNFEILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPS 218
            :||::||||...:||:..||.:||.:..|||..|.|.:|.:....||..||.||:|.|:.|.||:
Human   220 VTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCNDCNQKQKHDSFSHSRSRINAYKGLASPA 284

  Fly   219 LICLTSNDPIITAFQLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYD 283
            .:.|:|.||::||.:||.||..||..|:|.|::|..|..||:.|.|.|||..|.:.|:..|||.|
Human   285 YLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGD 349

  Fly   284 PQMSSYEPGD--RMSLTRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQ 346
              :.:.:.||  |.:|:||..||.|:.||||||.|.||.|.||||:.|.|.|::::..|.:.:..
Human   350 --VETLQSGDHGRPNLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLA 412

  Fly   347 VAVLFPLYCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVRIFGTTRM 411
            ||:..|...|||..||..:.|::||.|||||:.||:|:..||.:|::  ..||    |..||..:
Human   413 VAIGLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVM--NAAD----RFEGTKLL 471

  Fly   412 KKEL----AEQELRQRGQTPSKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSL 472
            ..|.    |:|..|.:....|.:|::::.:|||.:|.|.:||:..|.|.||..:||.:||...::
Human   472 PNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAI 536

  Fly   473 YVSVMCLRAFAY---------------IQQATEIARDPQMAY--IPREKWHDFDPQLIAEGLFAA 520
            :.:....|..|:               ::..|::.....:.|  :.|.||...|||:|:|||:|.
Human   537 FAASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAI 601

  Fly   521 ANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFACGLNQLLWYFAALEKSK 585
            |.|.|..::.::...|...|||||||||.|.||.||..|:.:|..||..|:..|..|:...::::
Human   602 AVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNE 666

  Fly   586 CYVLPGGEADWGSHGDSCMKWRRFGNLFESSQSLFWASFGMVGLDDFELSGIKSYTRFWGLLMFG 650
            .                      |..:.||.::||||.||:..:....::....:....|.:::|
Human   667 A----------------------FTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYG 709

  Fly   651 SYSVINVIVLLNLLIAMMSNSYAMIDEHSDTEWKFARTKLWMSYFEDSATLPPPFNVLPS----- 710
            .|:|..||||||:||||:::|:..|::.:|.||||||.|||.||||:..|||.|||::||     
Human   710 VYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLF 774

  Fly   711 ------VKWVIRIFRKSSK-----------------------------TIDRQRSKKRKE----- 735
                  .||:..:|:...|                             ::|:::....|:     
Human   775 YLLLKLKKWISELFQGHKKGFQEDAEMNKINEEKKLGILGSHEDLSKLSLDKKQVGHNKQPSIRS 839

  Fly   736 QEQF---------SEYDNIMRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLE 787
            .|.|         .:|..||:.|:.|||.......|::.|:|.::.|:|.:|:::|||:||
Human   840 SEDFHLNSFNNPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLE 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 282/826 (34%)
ANK 48..195 CDD:238125 57/160 (36%)
ANK repeat 78..114 CDD:293786 17/37 (46%)
ANK repeat 134..177 CDD:293786 15/54 (28%)
TRP_2 187..246 CDD:285535 26/58 (45%)
DUF2031 <706..>805 CDD:299055 29/136 (21%)
TRPC6NP_004612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
trp 82..897 CDD:273311 287/836 (34%)
ANK 1 97..126 11/31 (35%)
ANK 2 132..161 12/28 (43%)
ANK repeat 132..159 CDD:293786 12/26 (46%)
ANK repeat 161..185 CDD:293786 11/25 (44%)
ANK 3 163..189 11/27 (41%)
ANK repeat 212..247 CDD:293786 14/34 (41%)
ANK 4 218..247 13/28 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
43.770

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