DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and trpc6a

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_005161247.1 Gene:trpc6a / 563989 ZFINID:ZDB-GENE-040724-114 Length:874 Species:Danio rerio


Alignment Length:840 Identity:290/840 - (34%)
Similarity:450/840 - (53%) Gaps:101/840 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SSGVSHASSAPKSV----------GGCCVPLGLPQPLLLEEKKFLLAVERGDMPNVRRILQKALR 66
            |.|..|..:..:.|          |...:..|.|..|...|::||.|.|.|::|.|||:|::.  
Zfish    42 SYGNYHGENVARQVLPKSRRQAVRGAAYMFNGHPNSLTPLEERFLDAAEYGNIPVVRRMLEEL-- 104

  Fly    67 HQHININCMDPLGRRALTLAIDNENLEMVELLVVMGVETK--DALLHAINAEFVEAVELLLEHEE 129
             ..:::||:|.:|:.||.||:.||:||:.|||:.....::  ||||.||:..:...||.:|.|:.
Zfish   105 -PELDVNCVDYMGQNALQLAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYTRIVEAILSHKA 168

  Fly   130 L--------------IYKEGEPYSWQKVDINTAMFAPDITPLMLAAHKNNFEILRILLDRGAAVP 180
            .              ::.:...|     |.:...|:.|:||::||:|.:.:||:.|||.:||.:.
Zfish   169 FADSRRLTASPSQAPMHDDFFAY-----DEDGTRFSHDVTPVILASHCHEYEIVHILLGKGARIE 228

  Fly   181 VPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPSLICLTSNDPIITAFQLSWELRNLALTE 245
            .|||..|.|:.|......||..||.||:|.||.|.||:.:.|::.||::.|.:||.||.:||..|
Zfish   229 QPHDYFCTCDTCNYHQKYDSFCHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIE 293

  Fly   246 QECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYDPQMSSYEPGDRMSLTRLVQAISYKQKK 310
            :|.|:||..|..||:.|.|.|||..|::.|:..|||.:...:...|| |.||.||..||.|:.||
Zfish   294 KEFKNEYRKLSMQCKDFVVGLLDLCRSTEEVEAILNGEEDDTLELPG-RPSLIRLKLAIKYELKK 357

  Fly   311 FVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQLMRKPFM 375
            ||||.|.||.|.||||:.||..|:::...|.:.:..||:..|...::|..||..:.|::||.||:
Zfish   358 FVAHPNCQQQLLSIWYEHLPELRQQTTAIKFLVVLGVAMGLPFLAMVYWVAPCSKMGKIMRGPFL 422

  Fly   376 KFLIHASSYLFFLFILILVSQRADDDFVRIFGTTRMKK----ELAEQELRQRGQTPSKLELIVVM 436
            ||:.||:|:..||.:|::  ..||    |..||..:..    :...|..|.:....:.:|::::.
Zfish   423 KFVAHAASFTIFLGLLVM--NAAD----RFDGTKLLPNMTIHDYPTQLFRMKTTPFTWMEMLIIS 481

  Fly   437 YVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSLYVSVMCLRAFA---------YIQQ----A 488
            :|||.:|.|.:||::.|.:.||...||.:||...:::|:....|..|         |:.:    .
Zfish   482 WVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVASFISRIMAFWHASSAQRYVDEHYTDL 546

  Fly   489 TEIARDPQMAYIPREK--WHDFDPQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVI 551
            |.:....::.|..|.:  |...||||::|||:|.|.|.|..::.::...|...|||||||||.|.
Zfish   547 TNVVLPFEVGYFQRARIDWLPSDPQLVSEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVK 611

  Fly   552 DIVKFFFIYTLVLFAFACGLNQLLWYFAALEKSKCYVLPGGEADWGSHGDSCMKWRRFGNLFESS 616
            ||.||..|:.||..||..|:..|..|:...::::.                      |..:.||.
Zfish   612 DIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNEA----------------------FTTVEESF 654

  Fly   617 QSLFWASFGMVGLDDFELSGIKSYTRFWGLLMFGSYSVINVIVLLNLLIAMMSNSYAMIDEHSDT 681
            ::||||.||:..:....::....:....|.:::|.|:|..||||||:||||::||:..|::.:|.
Zfish   655 KTLFWAIFGLSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDADV 719

  Fly   682 EWKFARTKLWMSYFEDSATLPPPFNVLPSVKWVI-----------------RIFRKSSKTIDRQR 729
            ||||||.|||.:|||:..|||.|||::||.|.|:                 :...|.|:..:..:
Zfish   720 EWKFARAKLWFTYFEEGRTLPVPFNLIPSPKSVLSLVMGVKGLLRELSVRQKAIMKGSELSELGQ 784

  Fly   730 SK--KRKEQEQFSEYDNIMRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLE 787
            ||  :.|...:.|.|..||:.||.||:.......|.:.|:|.::.|:|.:|:::|||:||
Zfish   785 SKTCQAKTLPRSSRYQKIMKRLVKRYIIKAQNDKECDEVNEGELKEIKQDISSLRYELLE 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 275/789 (35%)
ANK 48..195 CDD:238125 55/162 (34%)
ANK repeat 78..114 CDD:293786 17/37 (46%)
ANK repeat 134..177 CDD:293786 14/42 (33%)
TRP_2 187..246 CDD:285535 25/58 (43%)
DUF2031 <706..>805 CDD:299055 29/101 (29%)
trpc6aXP_005161247.1 trp 65..841 CDD:273311 282/812 (35%)
ANK repeat 76..113 CDD:293786 14/39 (36%)
ANK 88..221 CDD:238125 45/140 (32%)
ANK repeat 115..146 CDD:293786 12/30 (40%)
ANK repeat 194..228 CDD:293786 14/33 (42%)
TRP_2 235..294 CDD:285535 25/58 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.770

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