DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and Trpgamma

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster


Alignment Length:1144 Identity:505/1144 - (44%)
Similarity:686/1144 - (59%) Gaps:149/1144 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LLLEEKKFLLAVERGDMPNVRRILQKALRHQHININCMDPLGRRALTLAIDNENLEMVELLVVMG 102
            |.|||||||||||||||...||:||||...::||:||:|||||.||.:|||||||||||||:...
  Fly    78 LTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENLEMVELLINYN 142

  Fly   103 VETKDALLHAINAEFVEAVELLLEHEELIYKEGEPYSWQKVDINTAMFAPDITPLMLAAHKNNFE 167
            |:|||||||:|:.|||||||:||:||.:.:.....:||:....:|:.|.||||||:||||::|:|
  Fly   143 VDTKDALLHSISEEFVEAVEVLLDHENVTFHSEGNHSWESASEDTSTFTPDITPLILAAHRDNYE 207

  Fly   168 ILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPSLICLTSNDPIITAF 232
            |::|||||||.:|:|||:||||:|||:...|||||||.||:|.||||.|||||.|:|.|||:|||
  Fly   208 IIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALASPSLIALSSKDPILTAF 272

  Fly   233 QLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYDPQMSSYEPGDRMSL 297
            :||||||.|:..|.|.|:||.:||:|||.||..|||.||||:||.|:||:||....||.|:||.|
  Fly   273 ELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNHDPTGPVYEHGERMHL 337

  Fly   298 TRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAP 362
            .||..||..:|||||||||:||||:||||:||||||||::..:.:.|.::.::||::.|.|:.||
  Fly   338 NRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAP 402

  Fly   363 NCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVR--IFGTTRMKKELAEQELRQRGQ 425
            ....||.|||||:||:.|::||..|||:|:|.|||. :.|:.  .|..:.......|:...:||.
  Fly   403 YSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRI-ETFIGGWFFADSSGMLNTMEELPTKRGA 466

  Fly   426 TPSKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSLYVSVMCLRAFAYIQQATE 490
            .|:.:|.:::.:|.|.:|.||::::.||::.||.:|||.|||:.|||||:.:.||..::.|...|
  Fly   467 KPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKE 531

  Fly   491 IARDPQMAYIPREKWHDFDPQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVK 555
            :..:.....:|||:|..:||.||:||||:|||:||:||||::||:||||||||:||.|||:||:|
  Fly   532 MIYNSHATDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMK 596

  Fly   556 FFFIYTLVLFAFACGLNQLLWYFAALEKSKCYVLPGGEADWGSHG----DSCMKWRRFGNLFESS 616
            |||:|.||||||..||||||||:|.|||.:|..:....|....:|    ::|:.||||.||||::
  Fly   597 FFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFSNLFETT 661

  Fly   617 QSLFWASFGMVGLDDFELSGIKSYTRFWGLLMFGSYSVINVIVLLNLLIAMMSNSYAMIDEHSDT 681
            |:||||.||::.||.|||.|||.:|||||:||||:|||||::||||||||||::||.:|.|.:|.
  Fly   662 QTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADV 726

  Fly   682 EWKFARTKLWMSYFEDSATLPPPFNVLP-------SVKWVIRIFRKSSKTIDRQRSKK-RKEQEQ 738
            ||||||:|||:||||:..|.|||||::|       ::||:.|:|...|....|:..|. |::.:|
  Fly   727 EWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFCSGSSAARREHLKTIRRKAQQ 791

  Fly   739 FSE----YDNIMRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLEIFENSGMDVS-- 797
            .|:    |..|||:||.|||....||.|:..|:|||:||:|.:|:..|.|::||.:|||||.:  
  Fly   792 ASDRDFKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNEIKQDISAFRCELVEILKNSGMDTNVT 856

  Fly   798 -----SANKKERQPRPRRIKVWERRLMKGFQVAP----------VQNGCELDAFGNVNGQGEMQE 847
                 ...||.||.        ||||||||.:||          .:....||   |.:.|.|:..
  Fly   857 AGQGGGGGKKNRQK--------ERRLMKGFNIAPPGSTGSLAPVAEFSTSLD---NYDNQHEILS 910

  Fly   848 IKVESI--------------------PSKPAKETAKERFQRVARTVLLQSTTH------------ 880
            ..:.::                    ...|...||.:..|..|.|...|.|.:            
  Fly   911 STLSTLFTPNFMHKRQQSQAGSGGGGSESPTTPTAPQGTQGAAMTASSQVTKYNKSALKPYNKRI 975

  Fly   881 -----KWNVVLRAAKDSQIGRCTKNERKSLQNLGRAIEEAKRLIMLNPGCPSGRES-PI----RI 935
                 :|..::.|||   :|..:|       .|||:..|       :..|.|...| |:    |:
  Fly   976 AGHKKRWGTLIEAAK---VGNVSK-------MLGRSKSE-------DSVCNSSHTSTPVHGQMRV 1023

  Fly   936 EFEDEKTSTLLELLNQISAEISDSEKPKIRPIWRPPLKTVPARAMAANNTRSLTA-PELKISRKS 999
            .:.............:.|:....:..|.|..:...|.......:...:.|..||| ..||..||.
  Fly  1024 TYAQNSPQQEYGYHGETSSTTISTPTPTISVVSNSPAAHAGVGSHFFHTTSGLTAIAALKRKRKK 1088

  Fly  1000 SPAPTPTPTPGVSHTALSQFRNRELPLCP---SKLIANSAP--SAPTAPPKKSAPTA-------P 1052
                            .|..:|    :||   |...||:|.  :..|.....|.|.|       |
  Fly  1089 ----------------FSSSKN----ICPVTESVAAANAAEILNDKTLKRVSSYPAAEAGVQHNP 1133

  Fly  1053 TPTYKPTTHAPFSVEGGNRENTRASDGVRSDNSNFDIHV 1091
            ....||..|          |.|::.......||.|.:.:
  Fly  1134 AQLVKPRRH----------EQTQSQHDSVETNSTFTLSI 1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 413/753 (55%)
ANK 48..195 CDD:238125 92/146 (63%)
ANK repeat 78..114 CDD:293786 26/35 (74%)
ANK repeat 134..177 CDD:293786 22/42 (52%)
TRP_2 187..246 CDD:285535 40/58 (69%)
DUF2031 <706..>805 CDD:299055 43/117 (37%)
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 422/763 (55%)
ANK 113..>217 CDD:238125 64/103 (62%)
ANK repeat 118..147 CDD:293786 20/28 (71%)
ANK repeat 175..217 CDD:293786 22/41 (54%)
TRP_2 227..286 CDD:285535 40/58 (69%)
RRT14 <778..892 CDD:293680 48/121 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450244
Domainoid 1 1.000 270 1.000 Domainoid score I1782
eggNOG 1 0.900 - - E1_KOG3609
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 774 1.000 Inparanoid score I517
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13813at33392
OrthoFinder 1 1.000 - - FOG0000660
OrthoInspector 1 1.000 - - mtm6331
orthoMCL 1 0.900 - - OOG6_102173
Panther 1 1.100 - - P PTHR10117
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X802
1110.800

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