DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trpl and Trpc7

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_006517325.1 Gene:Trpc7 / 26946 MGIID:1349470 Length:906 Species:Mus musculus


Alignment Length:819 Identity:269/819 - (32%)
Similarity:410/819 - (50%) Gaps:163/819 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EEKKFLLAVERGDMPNVRRILQKALRHQHININCMDPLGRRALTLAIDNENLEMVELLVVMG--V 103
            ||::||.:.|.|::|.||::|:::   :.:|.||:|.:|:.||.||:.||:||:.|||:...  .
Mouse   142 EEERFLDSAEYGNIPVVRKMLEES---KTLNFNCVDYMGQNALQLAVGNEHLEVTELLLKKENLA 203

  Fly   104 ETKDALLHAINAEFVEAVELLLEH---------------EELIYKEGEPYSWQKVDINTAMFAPD 153
            ...||||.||:..:|..||.:|.|               :||  ::.:.|::   |.:...|:.|
Mouse   204 RVGDALLLAISKGYVRIVEAILSHPAFAQGQRLTLSPLEQEL--RDDDFYAY---DEDGTRFSHD 263

  Fly   154 ITPLMLAAHKNNFEILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPS 218
            |||::||||...:||:.|||.:||.:..|||..|.|.||.....:||..||.||:|.|:.|.|.:
Mouse   264 ITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKCNECTEKQRKDSFSHSRSRMNAYKGLASAA 328

  Fly   219 LICLTSNDPIITAFQLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYD 283
            .:.|:|.||::||.:||.||..||..|.|.|::|..|..||:.|.|.:||..|.:.|:..|||.|
Mouse   329 YLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGD 393

  Fly   284 PQMSSYEPGDRMSLTRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVA 348
            ..:..:....|.||:|:..||.|:.||.                                     
Mouse   394 VNLQVWSDHHRPSLSRIKLAIKYEVKKL------------------------------------- 421

  Fly   349 VLFPLYCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVRIFGTTRMKK 413
                              ||.:|.|||||:.||.|:..||.:|::   .|.|   |..|...:..
Mouse   422 ------------------GQTLRSPFMKFVAHAVSFTIFLGLLVV---NASD---RFEGVKTLPN 462

  Fly   414 E----LAEQELRQRGQTPSKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSLYV 474
            |    ..:|..|.:....|..|::::.:|:|.:|.|.:||:..|.:.|:.::||.:||...|::|
Mouse   463 ETFTDYPKQIFRVKTTQFSWTEMLIMKWVLGMIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFV 527

  Fly   475 SVMCLRAFA-------------YIQQAT--EIARDPQMAYI--PREKWHDFDPQLIAEGLFAAAN 522
            :....|..|             |:|..|  .::..|::||.  .|:||...|||:|:|||:|.|.
Mouse   528 ASFTARFMAFLKASEAQLYVDQYVQDVTLHNVSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAV 592

  Fly   523 VFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFACGLNQLLWYFAALEKSKCY 587
            |.|..::.::...|...|||||||||.|.||.||..|:.:|..||..|:..|..|:...:.:.. 
Mouse   593 VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKYNPA- 656

  Fly   588 VLPGGEADWGSHGDSCMKWRRFGNLFESSQSLFWASFGMVGLDDFELSGIKSYTRFWGLLMFGSY 652
                                 |..:.||.::|||:.||:..:....|.....:....|.:::|.|
Mouse   657 ---------------------FTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVY 700

  Fly   653 SVINVIVLLNLLIAMMSNSYAMIDEHSDTEWKFARTKLWMSYFEDSATLPPPFNVLPSVK----W 713
            :|..|:||||:||||::|||..|:|.:|.||||||.|||:|||::..|||.|||::||.|    .
Mouse   701 NVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYL 765

  Fly   714 VIRI---------------------------FRKSSKTIDRQRSKKRKEQEQFSE---YDNIMRS 748
            ::||                           |||:......:.|:.......||:   |..||:.
Mouse   766 IMRIKMCLIELCQSKAKRCENDLEMGMLNSKFRKTRYQAGMRNSENLTANSTFSKPTRYQKIMKR 830

  Fly   749 LVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLE 787
            |:.|||.......||:.|:|.::.|:|.:|:::|||:||
Mouse   831 LIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLE 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 261/807 (32%)
ANK 48..195 CDD:238125 60/163 (37%)
ANK repeat 78..114 CDD:293786 17/37 (46%)
ANK repeat 134..177 CDD:293786 16/42 (38%)
TRP_2 187..246 CDD:285535 26/58 (45%)
DUF2031 <706..>805 CDD:299055 31/116 (27%)
Trpc7XP_006517325.1 trp 126..866 CDD:273311 265/814 (33%)
ANK repeat 176..207 CDD:293786 12/30 (40%)
ANK repeat 208..254 CDD:293786 13/50 (26%)
ANK repeat 256..291 CDD:293786 16/34 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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