DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and LOC103910003

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_009296662.2 Gene:LOC103910003 / 103910003 -ID:- Length:482 Species:Danio rerio


Alignment Length:496 Identity:228/496 - (45%)
Similarity:321/496 - (64%) Gaps:32/496 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VELLVVMGVETKDALLHAINAEFVEAVELLLEHEELIYKEGEPYSWQKVDINTAMFAPDITPLML 159
            :|||:..||.|.||||:||..|.|.||||||.:.:...::..|.  ..:|...:.|.|||||:||
Zfish     1 MELLLSHGVHTGDALLYAIRKEVVGAVELLLSYRKPCGEKQVPS--LMMDTQFSEFTPDITPIML 63

  Fly   160 AAHKNNFEILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPSLICLTS 224
            |||.||:||:::|:.|...:|.||.|||.|.|||..:..||||||.||:|||:||.|||||.|:|
Zfish    64 AAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSS 128

  Fly   225 NDPIITAFQLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNY-DPQMSS 288
            .|||:|||:|.|||:.|:..|.|.:.||.:|.:||:.||.|||||.|:|.||..|||: |.....
Zfish   129 EDPILTAFRLGWELKELSKVENEFRQEYDELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEE 193

  Fly   289 YEPGDRMSLTRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPL 353
            .:.|:...|.:|..||.|.||:|||..|.||||:::||||.||:||:....|::....:.:|||:
Zfish   194 LDLGECRDLAKLKLAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPV 258

  Fly   354 YCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVRIFGTTRMKKELAEQ 418
            :.:||:.||....|..::|||:||:.|.:|||.|||:|:|.||                 .:.:.
Zfish   259 FSIIYLLAPKSTLGTFIKKPFIKFICHTASYLTFLFLLLLASQ-----------------HIVQT 306

  Fly   419 ELRQRGQTPSKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSLYVSVMCLRAFA 483
            :|..:|..|:.:|.:::.:|:||:|.|::|::..|...|:.:.||.:||..||||::.:.|:..|
Zfish   307 DLHVQGPPPTFVEWMILPWVLGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKMVA 371

  Fly   484 YIQQATEIARDPQMAYIPREKWHDFDPQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGR 548
            |.:..:.         .||.:|..:.|.||||.|||.||:||:|:|:.||:.|.|||||||||||
Zfish   372 YFKYNSS---------RPRVEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPLQISLGR 427

  Fly   549 MVIDIVKFFFIYTLVLFAFACGLNQLLWYF---AALEKSKC 586
            |::||:||.|||.|||.|||.|||||.:|:   |:.|.:.|
Zfish   428 MLLDILKFLFIYCLVLLAFANGLNQLYFYYETKASEEPNNC 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 228/496 (46%)
ANK 48..195 CDD:238125 49/99 (49%)
ANK repeat 78..114 CDD:293786 11/18 (61%)
ANK repeat 134..177 CDD:293786 19/42 (45%)
TRP_2 187..246 CDD:285535 36/58 (62%)
DUF2031 <706..>805 CDD:299055
LOC103910003XP_009296662.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D355630at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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